Detailed information NTG1136188

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: DQM44_RS02020
• Genome accession: NZ_LS483318
• Coordinates: 370983..371573 (+)
• Length: 196 a.a.
• NCBI ID: WP_002985850.1
• Uniprot ID: A0A9X8T4H8
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain NCTC5370
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 365983..376573

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM44_RS02005 (NCTC5370_00414)	-	367213..368847 (+)	1635	WP_015016717.1	polysaccharide biosynthesis protein	-
DQM44_RS02010 (NCTC5370_00415)	-	368833..369918 (-)	1086	WP_111711555.1	IS30 family transposase	-
DQM44_RS02015 (NCTC5370_00416)	upp	370132..370761 (+)	630	WP_003058279.1	uracil phosphoribosyltransferase	-
DQM44_RS02020 (NCTC5370_00417)	clpP	370983..371573 (+)	591	WP_002985850.1	ATP-dependent Clp protease proteolytic subunit	Regulator
DQM44_RS02025 (NCTC5370_00418)	-	371959..372255 (+)	297	WP_003058282.1	DUF4298 domain-containing protein	-
DQM44_RS02030 (NCTC5370_00419)	-	372330..372800 (+)	471	WP_003062005.1	YlbF family regulator	-
DQM44_RS02035 (NCTC5370_00420)	-	372776..373066 (+)	291	WP_003060978.1	YlbG family protein	-
DQM44_RS02040 (NCTC5370_00421)	-	373315..374487 (+)	1173	WP_003058679.1	ABC transporter substrate-binding protein	-
DQM44_RS02045 (NCTC5370_00422)	-	374676..375545 (+)	870	WP_003060403.1	branched-chain amino acid ABC transporter permease	-
DQM44_RS02050 (NCTC5370_00423)	-	375549..376502 (+)	954	WP_022554290.1	branched-chain amino acid ABC transporter permease	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21648.88 Da
• Isoelectric Point: 5.2834

>NTDB_id=1136188 DQM44_RS02020 WP_002985850.1 370983..371573(+) (clpP) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC5370]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK
TIKQIHKDAERDYWMSAEETLAYGFIDEIMENNELK

Nucleotide

• Length: 591 bp

>NTDB_id=1136188 DQM44_RS02020 WP_002985850.1 370983..371573(+) (clpP) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC5370]
ATGATTCCTGTTGTTATTGAACAAACTAGTCGTGGTGAACGTTCTTATGACATTTACTCACGCTTATTAAAAGACCGTAT
TATCATGTTGACAGGCCCTGTTGAGGACAACATGGCAAACTCTGTCATTGCGCAGCTTTTATTCCTTGATGCTCAGGACA
ATACGAAAGACATTTATTTGTATGTCAACACACCTGGTGGTTCTGTTTCAGCGGGTTTGGCTATTGTCGACACCATGAAC
TTTATCAAAGCTGATGTCCAAACCATTGTTATGGGGATGGCCGCTTCTATGGGGACTGTCATTGCTTCATCAGGTACTAA
GGGCAAACGCTTCATGTTACCAAATGCAGAATACATGATTCACCAACCAATGGGTGGTACAGGTGGTGGTACACAACAAA
CAGATATGGCCATTGCTGCAGAGCACCTCTTAAAAACTCGTCACCGTTTAGAAAAAATCTTAGCACAAAATGCTGGAAAG
ACCATTAAACAAATTCACAAAGATGCTGAACGTGATTATTGGATGAGTGCTGAAGAAACCTTGGCTTACGGTTTCATTGA
TGAAATCATGGAAAATAACGAATTAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes MGAS315	100	100	1
clpP	Streptococcus pyogenes JRS4	100	100	1
clpP	Streptococcus mutans UA159	90.816	100	0.908
clpP	Streptococcus pneumoniae Rx1	90.769	99.49	0.903
clpP	Streptococcus pneumoniae D39	90.769	99.49	0.903
clpP	Streptococcus pneumoniae R6	90.769	99.49	0.903
clpP	Streptococcus pneumoniae TIGR4	90.769	99.49	0.903
clpP	Streptococcus thermophilus LMG 18311	89.796	100	0.898
clpP	Streptococcus thermophilus LMD-9	89.796	100	0.898
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	86.224	100	0.862
clpP	Lactococcus lactis subsp. cremoris KW2	85.714	100	0.857
clpP	Bacillus subtilis subsp. subtilis str. 168	57.143	100	0.571
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	56.995	98.469	0.561