Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   DQL09_RS07145 Genome accession   NZ_LS483307
Coordinates   1353352..1353534 (-) Length   60 a.a.
NCBI ID   WP_011054793.1    Uniprot ID   A0A5S4TJP1
Organism   Streptococcus pyogenes strain NCTC5163     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1348352..1358534
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL09_RS07135 (NCTC5163_01435) rocA 1349792..1351147 (-) 1356 WP_111677392.1 transcriptional regulator RocA -
  DQL09_RS07140 (NCTC5163_01436) rlmD 1351806..1353161 (-) 1356 WP_111677393.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  DQL09_RS07145 (NCTC5163_01437) prx 1353352..1353534 (-) 183 WP_011054793.1 hypothetical protein Regulator
  DQL09_RS07150 (NCTC5163_01438) speA 1353755..1354510 (+) 756 WP_009880239.1 streptococcal pyrogenic exotoxin SpeA -
  DQL09_RS07155 (NCTC5163_01439) - 1354632..1355291 (-) 660 WP_009880240.1 hypothetical protein -
  DQL09_RS07160 (NCTC5163_01440) - 1355291..1355512 (-) 222 WP_009880241.1 hypothetical protein -
  DQL09_RS07165 (NCTC5163_01441) - 1355522..1356295 (-) 774 WP_011054795.1 hypothetical protein -
  DQL09_RS07170 (NCTC5163_01442) - 1356306..1356908 (-) 603 WP_011054796.1 hypothetical protein -
  DQL09_RS07175 (NCTC5163_01443) - 1356920..1357684 (-) 765 WP_011054797.1 CHAP domain-containing protein -
  DQL09_RS07180 (NCTC5163_01444) - 1357686..1358018 (-) 333 WP_011054798.1 phage holin -
  DQL09_RS07185 (NCTC5163_01445) - 1358018..1358341 (-) 324 WP_015055952.1 hypothetical protein -
  DQL09_RS10455 (NCTC5163_01446) - 1358355..1358477 (-) 123 WP_269458599.1 hypothetical protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 7014.08 Da        Isoelectric Point: 4.3313

>NTDB_id=1135788 DQL09_RS07145 WP_011054793.1 1353352..1353534(-) (prx) [Streptococcus pyogenes strain NCTC5163]
MLYIDEFKEAIDKGYILGDTVAIVRKNGKIFDYVLPHEKVRDDEVVTVERVEEVMVELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=1135788 DQL09_RS07145 WP_011054793.1 1353352..1353534(-) (prx) [Streptococcus pyogenes strain NCTC5163]
ATGTTATATATAGATGAGTTTAAAGAAGCGATTGATAAGGGGTATATTTTAGGTGACACAGTAGCGATAGTGCGTAAAAA
CGGAAAGATATTTGATTATGTGTTACCACACGAAAAAGTGAGAGATGATGAAGTTGTGACGGTAGAGAGAGTGGAAGAAG
TGATGGTGGAATTAGACAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

100

100

1
  prx Streptococcus pyogenes MGAS315

78.333

100

0.783
  prx Streptococcus pyogenes MGAS315

76.667

100

0.767
  prx Streptococcus pyogenes MGAS315

75

100

0.75
  prx Streptococcus pyogenes MGAS8232

75

100

0.75
  prx Streptococcus pyogenes MGAS315

68.333

100

0.683
  prx Streptococcus pyogenes MGAS315

76.19

70

0.533

Multiple sequence alignment