Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   DQL09_RS05235 Genome accession   NZ_LS483307
Coordinates   1006058..1006246 (-) Length   62 a.a.
NCBI ID   WP_002984426.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC5163     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1001058..1011246
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL09_RS05210 (NCTC5163_01032) - 1002862..1003233 (+) 372 WP_002989617.1 GntR family transcriptional regulator -
  DQL09_RS05215 (NCTC5163_01033) - 1003233..1003931 (+) 699 WP_002984437.1 ABC transporter ATP-binding protein -
  DQL09_RS05220 (NCTC5163_01034) - 1003941..1004726 (+) 786 WP_111677291.1 ABC transporter permease -
  DQL09_RS05225 (NCTC5163_01035) - 1004853..1005467 (-) 615 WP_002989607.1 TVP38/TMEM64 family protein -
  DQL09_RS05235 (NCTC5163_01037) prx 1006058..1006246 (-) 189 WP_002984426.1 hypothetical protein Regulator
  DQL09_RS05240 (NCTC5163_01038) sda3 1006484..1007284 (+) 801 WP_011285611.1 streptodornase Sda3 -
  DQL09_RS05245 (NCTC5163_01039) - 1007555..1007989 (+) 435 WP_011017966.1 hypothetical protein -
  DQL09_RS05250 (NCTC5163_01040) - 1008059..1009264 (-) 1206 WP_111677292.1 glucosaminidase domain-containing protein -
  DQL09_RS05255 (NCTC5163_01042) - 1009380..1009607 (-) 228 WP_003058873.1 phage holin -
  DQL09_RS05260 (NCTC5163_01043) - 1009604..1009879 (-) 276 WP_002987582.1 hypothetical protein -
  DQL09_RS05265 (NCTC5163_01044) - 1009889..1010506 (-) 618 WP_111677293.1 DUF1366 domain-containing protein -
  DQL09_RS05270 (NCTC5163_01045) - 1010509..1010670 (-) 162 WP_002987333.1 hypothetical protein -

Sequence


Protein


Download         Length: 62 a.a.        Molecular weight: 7253.32 Da        Isoelectric Point: 4.2550

>NTDB_id=1135779 DQL09_RS05235 WP_002984426.1 1006058..1006246(-) (prx) [Streptococcus pyogenes strain NCTC5163]
MLTYDEFKQAIDRGYITGDTVMIVRKNGQIFDYVLPHEKVKNGEVVTEEIVEEVMVELDYIK

Nucleotide


Download         Length: 189 bp        

>NTDB_id=1135779 DQL09_RS05235 WP_002984426.1 1006058..1006246(-) (prx) [Streptococcus pyogenes strain NCTC5163]
ATGCTAACATACGACGAGTTTAAACAAGCGATTGACCGTGGATATATCACAGGAGACACAGTTATGATCGTGCGTAAAAA
CGGACAGATTTTTGATTATGTTTTGCCACATGAGAAAGTAAAAAATGGAGAAGTTGTGACCGAGGAGATAGTGGAAGAAG
TGATGGTGGAATTAGACTATATCAAATGA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

90.323

100

0.903

  prx Streptococcus pyogenes MGAS8232

87.931

93.548

0.823

  prx Streptococcus pyogenes MGAS315

87.931

93.548

0.823

  prx Streptococcus pyogenes MGAS315

83.051

95.161

0.79

  prx Streptococcus pyogenes MGAS315

79.661

95.161

0.758

  prx Streptococcus pyogenes MGAS315

87.805

66.129

0.581

  prx Streptococcus pyogenes MGAS315

78.571

67.742

0.532


Multiple sequence alignment