Detailed information NTG1135486

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: DQM39_RS08220
• Genome accession: NZ_LS483298
• Coordinates: 1565675..1566265 (-)
• Length: 196 a.a.
• NCBI ID: WP_002985850.1
• Uniprot ID: A0A9X8T4H8
• Organism: Streptococcus pyogenes strain NCTC8225
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1560675..1571265

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM39_RS08185 (NCTC8225_01642)	-	1560856..1561248 (-)	393	WP_002985833.1	DUF5684 domain-containing protein	-
DQM39_RS08190 (NCTC8225_01643)	rsmI	1561275..1562138 (-)	864	WP_002985836.1	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	-
DQM39_RS08195 (NCTC8225_01644)	yabA	1562143..1562466 (-)	324	WP_002985838.1	DNA replication initiation control protein YabA	-
DQM39_RS08200 (NCTC8225_01645)	-	1562870..1563109 (-)	240	WP_032467296.1	PSP1 C-terminal domain-containing protein	-
DQM39_RS08205 (NCTC8225_01646)	-	1563128..1564003 (-)	876	WP_002985844.1	DNA polymerase III subunit delta'	-
DQM39_RS08210 (NCTC8225_01647)	tmk	1564021..1564656 (-)	636	WP_032464192.1	dTMP kinase	-
DQM39_RS08215 (NCTC8225_01648)	-	1564905..1565180 (-)	276	WP_002985847.1	YlbG family protein	-
DQM39_RS08220 (NCTC8225_01649)	clpP	1565675..1566265 (-)	591	WP_002985850.1	ATP-dependent Clp protease proteolytic subunit	Regulator
DQM39_RS08230 (NCTC8225_01650)	upp	1566490..1567119 (-)	630	WP_002985854.1	uracil phosphoribosyltransferase	-
DQM39_RS08235 (NCTC8225_01651)	-	1567287..1568921 (-)	1635	WP_002985856.1	polysaccharide biosynthesis protein	-
DQM39_RS08240 (NCTC8225_01652)	-	1569009..1570454 (+)	1446	WP_002985858.1	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21648.88 Da
• Isoelectric Point: 5.2834

>NTDB_id=1135486 DQM39_RS08220 WP_002985850.1 1565675..1566265(-) (clpP) [Streptococcus pyogenes strain NCTC8225]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK
TIKQIHKDAERDYWMSAEETLAYGFIDEIMENNELK

Nucleotide

• Length: 591 bp

>NTDB_id=1135486 DQM39_RS08220 WP_002985850.1 1565675..1566265(-) (clpP) [Streptococcus pyogenes strain NCTC8225]
ATGATTCCTGTTGTTATTGAACAAACTAGTCGTGGAGAACGTTCTTATGACATTTATTCACGTTTATTAAAAGACCGTAT
TATCATGTTAACAGGGCCTGTCGAAGACAACATGGCCAACTCTGTCATAGCGCAGCTCTTATTCCTTGACGCGCAAGACA
ACACGAAAGATATCTACCTATATGTCAACACACCAGGTGGCTCTGTCTCAGCAGGCTTGGCTATTGTCGATACCATGAAC
TTTATCAAGGCCGATGTGCAAACTATTGTCATGGGTATGGCAGCTTCTATGGGGACAGTCATTGCTTCATCAGGAACAAA
AGGCAAACGCTTTATGTTACCAAATGCAGAGTATATGATCCACCAGCCAATGGGTGGCACAGGCGGTGGCACGCAACAAA
CGGATATGGCTATCGCAGCAGAACATCTCTTAAAAACACGTCACCGTTTAGAAAAAATCTTAGCGCAAAATGCTGGAAAA
ACGATTAAACAAATCCATAAAGATGCTGAGCGTGATTATTGGATGAGTGCTGAAGAAACCTTGGCTTACGGTTTCATTGA
TGAAATCATGGAAAACAACGAACTAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes MGAS315	100	100	1
clpP	Streptococcus pyogenes JRS4	100	100	1
clpP	Streptococcus mutans UA159	90.816	100	0.908
clpP	Streptococcus pneumoniae Rx1	90.769	99.49	0.903
clpP	Streptococcus pneumoniae D39	90.769	99.49	0.903
clpP	Streptococcus pneumoniae R6	90.769	99.49	0.903
clpP	Streptococcus pneumoniae TIGR4	90.769	99.49	0.903
clpP	Streptococcus thermophilus LMG 18311	89.796	100	0.898
clpP	Streptococcus thermophilus LMD-9	89.796	100	0.898
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	86.224	100	0.862
clpP	Lactococcus lactis subsp. cremoris KW2	85.714	100	0.857
clpP	Bacillus subtilis subsp. subtilis str. 168	57.143	100	0.571
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	56.995	98.469	0.561