Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | H1W92_RS01870 | Genome accession | NZ_LR822039 |
| Coordinates | 346464..347054 (+) | Length | 196 a.a. |
| NCBI ID | WP_180475773.1 | Uniprot ID | - |
| Organism | Streptococcus thermophilus isolate STH_CIRM_1116 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 341464..352054
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H1W92_RS01840 (STHERMO_0380) | - | 341843..342437 (+) | 595 | Protein_314 | cation transporting ATPase C-terminal domain-containing protein | - |
| H1W92_RS01845 (STHERMO_0381) | - | 342741..343835 (+) | 1095 | WP_002946733.1 | cystathionine gamma-synthase | - |
| H1W92_RS01850 (STHERMO_0382) | - | 343846..345009 (+) | 1164 | WP_011680761.1 | MalY/PatB family protein | - |
| H1W92_RS01855 (STHERMO_0383) | - | 345085..345252 (+) | 168 | WP_014607986.1 | hypothetical protein | - |
| H1W92_RS10060 (STHERMO_0384) | - | 345293..345427 (+) | 135 | WP_014607987.1 | hypothetical protein | - |
| H1W92_RS01865 (STHERMO_0385) | upp | 345697..346326 (+) | 630 | WP_002946740.1 | uracil phosphoribosyltransferase | - |
| H1W92_RS01870 (STHERMO_0386) | clpP | 346464..347054 (+) | 591 | WP_180475773.1 | ATP-dependent Clp protease proteolytic subunit | Regulator |
| H1W92_RS01875 (STHERMO_0387) | - | 347141..347590 (+) | 450 | WP_011225507.1 | YlbF family regulator | - |
| H1W92_RS01880 (STHERMO_0388) | - | 347583..347864 (+) | 282 | WP_002949736.1 | YlbG family protein | - |
| H1W92_RS01885 (STHERMO_0389) | - | 348021..349196 (+) | 1176 | WP_011225508.1 | ABC transporter substrate-binding protein | - |
| H1W92_RS01890 (STHERMO_0390) | - | 349240..350124 (+) | 885 | WP_011225509.1 | branched-chain amino acid ABC transporter permease | - |
| H1W92_RS01895 (STHERMO_0391) | - | 350128..351078 (+) | 951 | WP_011225510.1 | branched-chain amino acid ABC transporter permease | - |
| H1W92_RS01900 (STHERMO_0392) | - | 351081..351845 (+) | 765 | WP_002947187.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21607.65 Da Isoelectric Point: 4.4829
>NTDB_id=1131928 H1W92_RS01870 WP_180475773.1 346464..347054(+) (clpP) [Streptococcus thermophilus isolate STH_CIRM_1116]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPIEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNNLEQILADNSGQ
PIEKVHVDAERDNWMSAQETLEYSFIDEIMTNNQLK
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPIEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNNLEQILADNSGQ
PIEKVHVDAERDNWMSAQETLEYSFIDEIMTNNQLK
Nucleotide
Download Length: 591 bp
>NTDB_id=1131928 H1W92_RS01870 WP_180475773.1 346464..347054(+) (clpP) [Streptococcus thermophilus isolate STH_CIRM_1116]
ATGATTCCGGTAGTTATTGAACAAACATCACGTGGTGAACGTTCTTATGACATTTACTCACGTTTGCTCAAGGATCGTAT
TATCATGTTAACAGGTCCTATAGAAGATAATATGGCAAACTCAATTATCGCTCAACTCTTGTTCTTGGATGCTCAAGACA
ATACAAAAGATATCTATCTGTATGTTAATACACCTGGTGGGTCAGTTTCAGCAGGCCTTGCCATTGTTGATACAATGAAC
TTCATCAAGTCTGATGTTCAAACCATCGTTATGGGGATGGCAGCATCAATGGGTACAATTATCGCTTCAAGCGGTACCAA
AGGTAAACGTTTCATGTTGCCAAATGCAGAATACATGATTCACCAACCAATGGGTGGTACTGGTGGTGGTACTCAACAAA
CAGATATGGCTATCGCTGCTGAACACTTGCTCAAGACTCGTAATAACTTGGAGCAAATCTTGGCTGATAATTCTGGTCAG
CCAATTGAAAAGGTTCATGTCGATGCTGAACGTGATAATTGGATGAGTGCCCAAGAAACACTTGAATATAGCTTCATTGA
TGAAATCATGACCAACAACCAATTAAAATAA
ATGATTCCGGTAGTTATTGAACAAACATCACGTGGTGAACGTTCTTATGACATTTACTCACGTTTGCTCAAGGATCGTAT
TATCATGTTAACAGGTCCTATAGAAGATAATATGGCAAACTCAATTATCGCTCAACTCTTGTTCTTGGATGCTCAAGACA
ATACAAAAGATATCTATCTGTATGTTAATACACCTGGTGGGTCAGTTTCAGCAGGCCTTGCCATTGTTGATACAATGAAC
TTCATCAAGTCTGATGTTCAAACCATCGTTATGGGGATGGCAGCATCAATGGGTACAATTATCGCTTCAAGCGGTACCAA
AGGTAAACGTTTCATGTTGCCAAATGCAGAATACATGATTCACCAACCAATGGGTGGTACTGGTGGTGGTACTCAACAAA
CAGATATGGCTATCGCTGCTGAACACTTGCTCAAGACTCGTAATAACTTGGAGCAAATCTTGGCTGATAATTCTGGTCAG
CCAATTGAAAAGGTTCATGTCGATGCTGAACGTGATAATTGGATGAGTGCCCAAGAAACACTTGAATATAGCTTCATTGA
TGAAATCATGACCAACAACCAATTAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Streptococcus thermophilus LMG 18311 |
99.49 |
100 |
0.995 |
| clpP | Streptococcus thermophilus LMD-9 |
99.49 |
100 |
0.995 |
| clpP | Streptococcus pneumoniae D39 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pneumoniae R6 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pneumoniae TIGR4 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pneumoniae Rx1 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pyogenes MGAS315 |
89.286 |
100 |
0.893 |
| clpP | Streptococcus pyogenes JRS4 |
89.286 |
100 |
0.893 |
| clpP | Streptococcus mutans UA159 |
87.245 |
100 |
0.872 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
86.735 |
100 |
0.867 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
86.224 |
100 |
0.862 |
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
58.673 |
100 |
0.587 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
58.031 |
98.469 |
0.571 |