Detailed information NTG1131884

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: H1W87_RS04325
• Genome accession: NZ_LR822037
• Coordinates: 810041..810880 (+)
• Length: 279 a.a.
• NCBI ID: WP_179967040.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus isolate STH_CIRM_1121
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 805041..815880

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H1W87_RS04295 (STHERMO_0929)	-	805456..805983 (+)	528	WP_041827017.1	ECF transporter S component	-
H1W87_RS04300 (STHERMO_0930)	-	806007..806522 (+)	516	WP_179967038.1	transcription repressor NadR	-
H1W87_RS04305 (STHERMO_0931)	-	806617..807306 (+)	690	WP_179967039.1	XRE family transcriptional regulator	-
H1W87_RS04310 (STHERMO_0932)	ylqF	807434..808288 (+)	855	WP_002950602.1	ribosome biogenesis GTPase YlqF	-
H1W87_RS04315 (STHERMO_0933)	-	808275..809042 (+)	768	WP_002950603.1	ribonuclease HII	-
H1W87_RS04320 (STHERMO_0934)	-	809053..809973 (+)	921	WP_014608255.1	ROK family protein	-
H1W87_RS04325 (STHERMO_0935)	dprA	810041..810880 (+)	840	WP_179967040.1	DNA-processing protein DprA	Machinery gene
H1W87_RS04330 (STHERMO_0936)	topA	811048..813192 (+)	2145	WP_138496620.1	type I DNA topoisomerase	-
H1W87_RS04335 (STHERMO_0937)	-	813310..814134 (+)	825	WP_011227157.1	TraX family protein	-
H1W87_RS04340 (STHERMO_0938)	-	814170..814829 (+)	660	WP_011227158.1	response regulator transcription factor	-

Sequence

Protein

• Length: 279 a.a.
• Molecular weight: 31272.32 Da
• Isoelectric Point: 9.0452

>NTDB_id=1131884 H1W87_RS04325 WP_179967040.1 810041..810880(+) (dprA) [Streptococcus thermophilus isolate STH_CIRM_1121]
MNNFELFKLKAAGLTNLNILNILDYQKNQDKKLSLRDMAVVSKSKNAVLFMEKYKNLDVKQLKKDFQRFPTLSIFDKEYP
IELKHSYNPPVLLFYQGNIDLLIKPKLAVVGARKCSETGKQSVRKIVHELGNAFTIVSGLARGIDTCAHMEALKNKGNTI
AVIGTGLDVYYPKENKALQDYMAKNHLVITEYGPGEQPLKYHYPERNRIISGLCQGVMVVEAKLRSGSLITCERAMEEGR
DVFAIPGNILDGKSDGCHHLIQEGAKCITTGFDIISEFS

Nucleotide

• Length: 840 bp

>NTDB_id=1131884 H1W87_RS04325 WP_179967040.1 810041..810880(+) (dprA) [Streptococcus thermophilus isolate STH_CIRM_1121]
ATGAATAACTTTGAACTTTTTAAACTAAAAGCTGCTGGATTGACGAATTTAAACATCCTTAACATTTTAGACTATCAAAA
AAATCAAGATAAAAAATTGAGCTTACGTGATATGGCAGTGGTATCTAAGTCTAAAAATGCCGTTCTCTTTATGGAAAAAT
ACAAGAATTTAGATGTTAAGCAGCTTAAGAAAGATTTTCAACGTTTTCCGACCTTATCAATTTTTGATAAGGAGTATCCC
ATTGAGCTAAAACATTCCTATAATCCTCCTGTCCTCCTCTTTTATCAAGGGAATATTGATTTGCTAATTAAACCCAAGTT
AGCAGTAGTTGGTGCCAGAAAGTGTTCTGAAACAGGCAAACAGTCTGTTCGAAAAATTGTTCATGAACTTGGGAATGCCT
TTACTATTGTAAGTGGCTTGGCGCGTGGAATTGATACTTGTGCTCATATGGAGGCCTTAAAAAATAAAGGTAACACCATT
GCAGTTATCGGGACTGGGCTAGACGTATATTATCCTAAAGAAAACAAAGCTTTACAGGACTATATGGCTAAAAATCATTT
AGTTATTACAGAATACGGACCGGGTGAACAGCCACTTAAATACCATTATCCTGAACGAAATCGGATAATTTCTGGATTGT
GTCAAGGGGTTATGGTGGTTGAAGCCAAGCTTCGCTCGGGAAGTCTTATTACTTGTGAGCGTGCAATGGAAGAAGGAAGA
GATGTTTTCGCCATACCAGGAAATATTTTAGATGGAAAATCGGATGGATGCCATCACCTCATTCAAGAGGGCGCAAAGTG
CATTACTACAGGATTTGACATCATTTCAGAATTTTCATAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (71-269)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-62)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	72.043	100	0.72
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	63.309	99.642	0.631
dprA/cilB/dalA	Streptococcus pneumoniae D39	63.309	99.642	0.631
dprA/cilB/dalA	Streptococcus pneumoniae R6	63.309	99.642	0.631
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	63.309	99.642	0.631
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	62.95	99.642	0.627
dprA/cilB/dalA	Streptococcus mitis SK321	62.95	99.642	0.627
dprA	Lactococcus lactis subsp. cremoris KW2	60.072	99.642	0.599
dprA	Acinetobacter baylyi ADP1	41.502	90.681	0.376
dprA	Latilactobacillus sakei subsp. sakei 23K	39.382	92.832	0.366