Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | H1W87_RS01800 | Genome accession | NZ_LR822037 |
| Coordinates | 330385..330975 (+) | Length | 196 a.a. |
| NCBI ID | WP_002949732.1 | Uniprot ID | Q5M5U4 |
| Organism | Streptococcus thermophilus isolate STH_CIRM_1121 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 325385..335975
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H1W87_RS01775 (STHERMO_0372) | - | 325763..326357 (+) | 595 | Protein_299 | cation transporting ATPase C-terminal domain-containing protein | - |
| H1W87_RS01780 (STHERMO_0373) | - | 326661..327755 (+) | 1095 | WP_180476776.1 | cystathionine gamma-synthase | - |
| H1W87_RS01785 (STHERMO_0374) | - | 327766..328929 (+) | 1164 | WP_011680761.1 | MalY/PatB family protein | - |
| H1W87_RS01790 (STHERMO_0376) | - | 329213..329488 (+) | 276 | WP_011225506.1 | hypothetical protein | - |
| H1W87_RS01795 (STHERMO_0377) | upp | 329618..330247 (+) | 630 | WP_002946740.1 | uracil phosphoribosyltransferase | - |
| H1W87_RS01800 (STHERMO_0378) | clpP | 330385..330975 (+) | 591 | WP_002949732.1 | ATP-dependent Clp protease proteolytic subunit | Regulator |
| H1W87_RS01805 (STHERMO_0379) | - | 331062..331511 (+) | 450 | WP_065972932.1 | YlbF family regulator | - |
| H1W87_RS01810 (STHERMO_0380) | - | 331504..331785 (+) | 282 | WP_084829365.1 | YlbG family protein | - |
| H1W87_RS01815 (STHERMO_0381) | - | 331942..333117 (+) | 1176 | WP_022096632.1 | ABC transporter substrate-binding protein | - |
| H1W87_RS01820 (STHERMO_0382) | - | 333161..334045 (+) | 885 | WP_011225509.1 | branched-chain amino acid ABC transporter permease | - |
| H1W87_RS01825 (STHERMO_0383) | - | 334049..334999 (+) | 951 | WP_096811862.1 | branched-chain amino acid ABC transporter permease | - |
| H1W87_RS01830 (STHERMO_0384) | - | 335002..335766 (+) | 765 | WP_002947187.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21577.62 Da Isoelectric Point: 4.4829
>NTDB_id=1131872 H1W87_RS01800 WP_002949732.1 330385..330975(+) (clpP) [Streptococcus thermophilus isolate STH_CIRM_1121]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPIEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNNLEQILADNSGQ
PIEKVHVDAERDNWMSAQETLEYGFIDEIMTNNQLK
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPIEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNNLEQILADNSGQ
PIEKVHVDAERDNWMSAQETLEYGFIDEIMTNNQLK
Nucleotide
Download Length: 591 bp
>NTDB_id=1131872 H1W87_RS01800 WP_002949732.1 330385..330975(+) (clpP) [Streptococcus thermophilus isolate STH_CIRM_1121]
ATGATTCCGGTAGTTATTGAACAAACATCACGTGGTGAACGTTCTTATGACATTTACTCACGTTTGCTCAAGGATCGTAT
TATCATGTTAACAGGTCCTATAGAAGATAATATGGCAAACTCAATTATCGCTCAACTCTTGTTCTTGGATGCTCAAGACA
ATACAAAAGATATCTATCTGTATGTTAATACACCTGGTGGGTCAGTTTCAGCAGGCCTTGCCATTGTTGATACAATGAAC
TTCATCAAGTCTGATGTTCAAACCATCGTTATGGGGATGGCAGCATCAATGGGGACAATTATCGCTTCAAGCGGTACCAA
AGGTAAACGTTTCATGTTGCCAAATGCAGAATACATGATTCACCAACCAATGGGTGGTACTGGTGGTGGTACTCAACAAA
CAGATATGGCTATCGCTGCTGAACACTTGCTCAAGACTCGTAATAACTTGGAGCAAATCTTGGCTGATAATTCTGGTCAG
CCAATTGAAAAGGTTCATGTCGATGCTGAACGTGATAATTGGATGAGTGCCCAAGAAACACTTGAATATGGCTTCATTGA
TGAAATCATGACTAACAACCAATTAAAATAA
ATGATTCCGGTAGTTATTGAACAAACATCACGTGGTGAACGTTCTTATGACATTTACTCACGTTTGCTCAAGGATCGTAT
TATCATGTTAACAGGTCCTATAGAAGATAATATGGCAAACTCAATTATCGCTCAACTCTTGTTCTTGGATGCTCAAGACA
ATACAAAAGATATCTATCTGTATGTTAATACACCTGGTGGGTCAGTTTCAGCAGGCCTTGCCATTGTTGATACAATGAAC
TTCATCAAGTCTGATGTTCAAACCATCGTTATGGGGATGGCAGCATCAATGGGGACAATTATCGCTTCAAGCGGTACCAA
AGGTAAACGTTTCATGTTGCCAAATGCAGAATACATGATTCACCAACCAATGGGTGGTACTGGTGGTGGTACTCAACAAA
CAGATATGGCTATCGCTGCTGAACACTTGCTCAAGACTCGTAATAACTTGGAGCAAATCTTGGCTGATAATTCTGGTCAG
CCAATTGAAAAGGTTCATGTCGATGCTGAACGTGATAATTGGATGAGTGCCCAAGAAACACTTGAATATGGCTTCATTGA
TGAAATCATGACTAACAACCAATTAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Streptococcus thermophilus LMG 18311 |
100 |
100 |
1 |
| clpP | Streptococcus thermophilus LMD-9 |
100 |
100 |
1 |
| clpP | Streptococcus pneumoniae D39 |
92.821 |
99.49 |
0.923 |
| clpP | Streptococcus pneumoniae R6 |
92.821 |
99.49 |
0.923 |
| clpP | Streptococcus pneumoniae TIGR4 |
92.821 |
99.49 |
0.923 |
| clpP | Streptococcus pneumoniae Rx1 |
92.821 |
99.49 |
0.923 |
| clpP | Streptococcus pyogenes MGAS315 |
89.796 |
100 |
0.898 |
| clpP | Streptococcus pyogenes JRS4 |
89.796 |
100 |
0.898 |
| clpP | Streptococcus mutans UA159 |
87.755 |
100 |
0.878 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
87.245 |
100 |
0.872 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
86.735 |
100 |
0.867 |
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
59.184 |
100 |
0.592 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
58.549 |
98.469 |
0.577 |