Detailed information
Bioinformatically predicted
Overview
| Name | comR | Type | Regulator |
| Locus tag | H1X38_RS01455 | Genome accession | NZ_LR822035 |
| Coordinates | 265645..266544 (+) | Length | 299 a.a. |
| NCBI ID | WP_014607953.1 | Uniprot ID | A0AAN1ZWJ0 |
| Organism | Streptococcus thermophilus isolate STH_CIRM_1051 | ||
| Function | activate transcription of comX; activate transcription of comS (predicted from homology) Competence regulation |
||
Genomic Context
Location: 260645..271544
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H1X38_RS01435 (STHERMO_0284) | trkA | 261781..263130 (-) | 1350 | WP_014607951.1 | Trk system potassium transporter TrkA | - |
| H1X38_RS01440 (STHERMO_0285) | - | 263419..263928 (+) | 510 | WP_014607952.1 | tRNA (cytidine(34)-2'-O)-methyltransferase | - |
| H1X38_RS01445 (STHERMO_0286) | - | 264240..264797 (+) | 558 | WP_002949523.1 | ECF transporter S component | - |
| H1X38_RS01450 (STHERMO_0287) | - | 264800..265450 (+) | 651 | WP_014727315.1 | phosphatase PAP2 family protein | - |
| H1X38_RS01455 (STHERMO_0288) | comR | 265645..266544 (+) | 900 | WP_014607953.1 | helix-turn-helix domain-containing protein | Regulator |
| H1X38_RS09780 | - | 266782..267213 (+) | 432 | Protein_235 | cysteine peptidase family C39 domain-containing protein | - |
| H1X38_RS09785 | - | 267243..267908 (+) | 666 | Protein_236 | ABC transporter transmembrane domain-containing protein | - |
| H1X38_RS09790 (STHERMO_0293) | comA | 267981..268190 (+) | 210 | WP_002946147.1 | hypothetical protein | Regulator |
| H1X38_RS01475 (STHERMO_0295) | - | 268245..268813 (+) | 569 | Protein_238 | ATP-binding cassette domain-containing protein | - |
| H1X38_RS01480 (STHERMO_0296) | - | 268921..269238 (+) | 318 | WP_011225454.1 | DUF805 domain-containing protein | - |
| H1X38_RS09795 (STHERMO_0297) | - | 269201..269485 (-) | 285 | WP_014727318.1 | hypothetical protein | - |
| H1X38_RS09800 (STHERMO_0299) | - | 269725..270621 (-) | 897 | WP_224102957.1 | urease cluster protein | - |
| H1X38_RS01490 (STHERMO_0300) | - | 271026..271541 (+) | 516 | WP_002949547.1 | AmiS/UreI family transporter | - |
Sequence
Protein
Download Length: 299 a.a. Molecular weight: 35289.70 Da Isoelectric Point: 5.0061
>NTDB_id=1131749 H1X38_RS01455 WP_014607953.1 265645..266544(+) (comR) [Streptococcus thermophilus isolate STH_CIRM_1051]
MNIKDSIGLRIKTERERQQMSREVLCLDGAELTVRQLIRIEKGESLPSLDRLSYIAKRLGKSMTELLDQDNITIPDEYYE
MKNRLIKFPTYRNPDRIKSKLTLIEEVYEKFFDILPEEELLTLDILENILSFTSWEESPKVEEIYEDLFEQVKRKRKFST
NDLLVIDYYFFHLYGRKQYDKKLFERIIKRVLNQEIWTDDVYNIVLFNDLMAIAALKIFHNSFSDFLTVVDKALAVIENS
QLYSYKPSVFVLKAKYELLHKENKKEAAENYDKAIMFASVLEDSVLEESIKAGKLADGL
MNIKDSIGLRIKTERERQQMSREVLCLDGAELTVRQLIRIEKGESLPSLDRLSYIAKRLGKSMTELLDQDNITIPDEYYE
MKNRLIKFPTYRNPDRIKSKLTLIEEVYEKFFDILPEEELLTLDILENILSFTSWEESPKVEEIYEDLFEQVKRKRKFST
NDLLVIDYYFFHLYGRKQYDKKLFERIIKRVLNQEIWTDDVYNIVLFNDLMAIAALKIFHNSFSDFLTVVDKALAVIENS
QLYSYKPSVFVLKAKYELLHKENKKEAAENYDKAIMFASVLEDSVLEESIKAGKLADGL
Nucleotide
Download Length: 900 bp
>NTDB_id=1131749 H1X38_RS01455 WP_014607953.1 265645..266544(+) (comR) [Streptococcus thermophilus isolate STH_CIRM_1051]
TTGAACATAAAAGACAGCATTGGACTAAGAATCAAAACTGAGCGTGAACGCCAACAGATGTCACGTGAAGTGCTATGTTT
AGATGGTGCGGAATTGACTGTTCGCCAGTTAATTCGTATTGAAAAGGGGGAGTCTCTCCCGTCTTTAGATAGATTATCGT
ATATTGCTAAACGTTTAGGAAAAAGTATGACAGAGTTATTGGATCAAGACAATATTACCATTCCTGACGAATATTATGAA
ATGAAGAATCGTTTGATTAAGTTTCCAACGTACAGAAACCCTGACAGAATAAAGTCTAAACTTACTTTGATTGAGGAAGT
CTATGAGAAATTTTTTGATATTCTTCCAGAAGAAGAATTATTAACTCTAGACATTCTCGAAAATATATTGAGTTTTACTA
GCTGGGAGGAGAGTCCAAAAGTTGAGGAGATATATGAAGACTTGTTTGAACAAGTCAAAAGGAAGAGGAAATTCTCAACT
AACGATTTATTAGTCATTGACTATTATTTCTTTCATCTTTATGGGAGAAAACAGTATGACAAAAAACTATTTGAAAGAAT
TATAAAGAGAGTATTAAATCAGGAAATTTGGACAGATGATGTTTACAATATTGTTTTATTTAATGATTTGATGGCTATTG
CTGCTTTAAAGATTTTTCACAATTCCTTCTCAGACTTCTTAACAGTTGTGGATAAAGCCTTAGCTGTCATAGAAAACTCA
CAATTATATAGCTACAAGCCTAGTGTTTTTGTACTTAAGGCTAAATATGAACTTCTGCATAAAGAAAACAAGAAAGAGGC
TGCAGAGAATTATGATAAGGCCATAATGTTTGCTTCCGTTTTGGAAGACTCGGTTTTAGAGGAAAGTATAAAGGCAGGAA
AATTGGCAGATGGTTTATAG
TTGAACATAAAAGACAGCATTGGACTAAGAATCAAAACTGAGCGTGAACGCCAACAGATGTCACGTGAAGTGCTATGTTT
AGATGGTGCGGAATTGACTGTTCGCCAGTTAATTCGTATTGAAAAGGGGGAGTCTCTCCCGTCTTTAGATAGATTATCGT
ATATTGCTAAACGTTTAGGAAAAAGTATGACAGAGTTATTGGATCAAGACAATATTACCATTCCTGACGAATATTATGAA
ATGAAGAATCGTTTGATTAAGTTTCCAACGTACAGAAACCCTGACAGAATAAAGTCTAAACTTACTTTGATTGAGGAAGT
CTATGAGAAATTTTTTGATATTCTTCCAGAAGAAGAATTATTAACTCTAGACATTCTCGAAAATATATTGAGTTTTACTA
GCTGGGAGGAGAGTCCAAAAGTTGAGGAGATATATGAAGACTTGTTTGAACAAGTCAAAAGGAAGAGGAAATTCTCAACT
AACGATTTATTAGTCATTGACTATTATTTCTTTCATCTTTATGGGAGAAAACAGTATGACAAAAAACTATTTGAAAGAAT
TATAAAGAGAGTATTAAATCAGGAAATTTGGACAGATGATGTTTACAATATTGTTTTATTTAATGATTTGATGGCTATTG
CTGCTTTAAAGATTTTTCACAATTCCTTCTCAGACTTCTTAACAGTTGTGGATAAAGCCTTAGCTGTCATAGAAAACTCA
CAATTATATAGCTACAAGCCTAGTGTTTTTGTACTTAAGGCTAAATATGAACTTCTGCATAAAGAAAACAAGAAAGAGGC
TGCAGAGAATTATGATAAGGCCATAATGTTTGCTTCCGTTTTGGAAGACTCGGTTTTAGAGGAAAGTATAAAGGCAGGAA
AATTGGCAGATGGTTTATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comR | Streptococcus thermophilus LMG 18311 |
99.666 |
100 |
0.997 |
| comR | Streptococcus thermophilus LMD-9 |
98.997 |
100 |
0.99 |
| comR | Streptococcus salivarius strain HSISS4 |
94.983 |
100 |
0.95 |
| comR | Streptococcus salivarius SK126 |
94.314 |
100 |
0.943 |
| comR/comR2 | Streptococcus sobrinus strain NIDR 6715-7 |
42.14 |
100 |
0.421 |
| comR/comR1 | Streptococcus sobrinus strain NIDR 6715-7 |
41.806 |
100 |
0.418 |