Detailed information
Bioinformatically predicted
Overview
| Name | comA | Type | Regulator |
| Locus tag | H1X38_RS09790 | Genome accession | NZ_LR822035 |
| Coordinates | 267981..268190 (+) | Length | 69 a.a. |
| NCBI ID | WP_002946147.1 | Uniprot ID | - |
| Organism | Streptococcus thermophilus isolate STH_CIRM_1051 | ||
| Function | processing and transport of ComC (predicted from homology) Competence regulation |
||
Genomic Context
Location: 262981..273190
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H1X38_RS01440 (STHERMO_0285) | - | 263419..263928 (+) | 510 | WP_014607952.1 | tRNA (cytidine(34)-2'-O)-methyltransferase | - |
| H1X38_RS01445 (STHERMO_0286) | - | 264240..264797 (+) | 558 | WP_002949523.1 | ECF transporter S component | - |
| H1X38_RS01450 (STHERMO_0287) | - | 264800..265450 (+) | 651 | WP_014727315.1 | phosphatase PAP2 family protein | - |
| H1X38_RS01455 (STHERMO_0288) | comR | 265645..266544 (+) | 900 | WP_014607953.1 | helix-turn-helix domain-containing protein | Regulator |
| H1X38_RS09780 | - | 266782..267213 (+) | 432 | Protein_235 | cysteine peptidase family C39 domain-containing protein | - |
| H1X38_RS09785 | - | 267243..267908 (+) | 666 | Protein_236 | ABC transporter transmembrane domain-containing protein | - |
| H1X38_RS09790 (STHERMO_0293) | comA | 267981..268190 (+) | 210 | WP_002946147.1 | hypothetical protein | Regulator |
| H1X38_RS01475 (STHERMO_0295) | - | 268245..268813 (+) | 569 | Protein_238 | ATP-binding cassette domain-containing protein | - |
| H1X38_RS01480 (STHERMO_0296) | - | 268921..269238 (+) | 318 | WP_011225454.1 | DUF805 domain-containing protein | - |
| H1X38_RS09795 (STHERMO_0297) | - | 269201..269485 (-) | 285 | WP_014727318.1 | hypothetical protein | - |
| H1X38_RS09800 (STHERMO_0299) | - | 269725..270621 (-) | 897 | WP_224102957.1 | urease cluster protein | - |
| H1X38_RS01490 (STHERMO_0300) | - | 271026..271541 (+) | 516 | WP_002949547.1 | AmiS/UreI family transporter | - |
| H1X38_RS01495 (STHERMO_0301) | - | 271566..271868 (+) | 303 | WP_002886558.1 | urease subunit gamma | - |
| H1X38_RS01500 (STHERMO_0302) | - | 271880..272191 (+) | 312 | WP_002886559.1 | urease subunit beta | - |
Sequence
Protein
Download Length: 69 a.a. Molecular weight: 8157.54 Da Isoelectric Point: 9.7339
>NTDB_id=1131797 H1X38_RS09790 WP_002946147.1 267981..268190(+) (comA) [Streptococcus thermophilus isolate STH_CIRM_1051]
MITYSMLLNYFTTPLINIIYLQSKIQQAKVANNCLQEVYVVNKEEKGQLKDLSFKQLDLKGVSHRFRYQ
MITYSMLLNYFTTPLINIIYLQSKIQQAKVANNCLQEVYVVNKEEKGQLKDLSFKQLDLKGVSHRFRYQ
Nucleotide
Download Length: 210 bp
>NTDB_id=1131797 H1X38_RS09790 WP_002946147.1 267981..268190(+) (comA) [Streptococcus thermophilus isolate STH_CIRM_1051]
TTGATTACCTATAGTATGTTGCTTAATTATTTTACGACTCCTTTAATTAATATTATCTATCTTCAATCTAAGATTCAGCA
AGCCAAGGTAGCCAATAATTGTCTTCAAGAAGTTTATGTTGTGAATAAGGAAGAAAAAGGTCAACTCAAAGATTTATCCT
TTAAACAATTAGACTTAAAAGGTGTTAGTCATCGTTTCAGATACCAATAA
TTGATTACCTATAGTATGTTGCTTAATTATTTTACGACTCCTTTAATTAATATTATCTATCTTCAATCTAAGATTCAGCA
AGCCAAGGTAGCCAATAATTGTCTTCAAGAAGTTTATGTTGTGAATAAGGAAGAAAAAGGTCAACTCAAAGATTTATCCT
TTAAACAATTAGACTTAAAAGGTGTTAGTCATCGTTTCAGATACCAATAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comA | Streptococcus gordonii str. Challis substr. CH1 |
54.167 |
100 |
0.565 |
| comA | Streptococcus mitis NCTC 12261 |
52.778 |
100 |
0.551 |
| comA | Streptococcus pneumoniae Rx1 |
51.389 |
100 |
0.536 |
| comA | Streptococcus pneumoniae D39 |
51.389 |
100 |
0.536 |
| comA | Streptococcus pneumoniae R6 |
51.389 |
100 |
0.536 |
| comA | Streptococcus pneumoniae TIGR4 |
51.389 |
100 |
0.536 |
| comA | Streptococcus mitis SK321 |
50 |
100 |
0.522 |
| comA/nlmT | Streptococcus mutans UA159 |
44.286 |
100 |
0.449 |