Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | H1W91_RS01885 | Genome accession | NZ_LR822032 |
| Coordinates | 345198..345788 (+) | Length | 196 a.a. |
| NCBI ID | WP_002949732.1 | Uniprot ID | Q5M5U4 |
| Organism | Streptococcus thermophilus isolate STH_CIRM_1050 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 340198..350788
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H1W91_RS01855 (STHERMO_0383) | - | 340576..341170 (+) | 595 | Protein_311 | cation transporting ATPase C-terminal domain-containing protein | - |
| H1W91_RS01860 (STHERMO_0384) | - | 341474..342568 (+) | 1095 | WP_180476776.1 | cystathionine gamma-synthase | - |
| H1W91_RS01865 (STHERMO_0385) | - | 342579..343742 (+) | 1164 | WP_180476777.1 | MalY/PatB family protein | - |
| H1W91_RS01870 (STHERMO_0386) | - | 343818..343985 (+) | 168 | WP_014607986.1 | hypothetical protein | - |
| H1W91_RS01875 (STHERMO_0387) | - | 344026..344301 (+) | 276 | WP_024704192.1 | hypothetical protein | - |
| H1W91_RS01880 (STHERMO_0388) | upp | 344431..345060 (+) | 630 | WP_002946740.1 | uracil phosphoribosyltransferase | - |
| H1W91_RS01885 (STHERMO_0389) | clpP | 345198..345788 (+) | 591 | WP_002949732.1 | ATP-dependent Clp protease proteolytic subunit | Regulator |
| H1W91_RS01890 (STHERMO_0390) | - | 345875..346324 (+) | 450 | WP_176243484.1 | YlbF family regulator | - |
| H1W91_RS01895 (STHERMO_0391) | - | 346317..346598 (+) | 282 | WP_002949736.1 | YlbG family protein | - |
| H1W91_RS01900 (STHERMO_0392) | - | 346755..347930 (+) | 1176 | WP_011225508.1 | ABC transporter substrate-binding protein | - |
| H1W91_RS01905 (STHERMO_0393) | - | 347974..348858 (+) | 885 | WP_011225509.1 | branched-chain amino acid ABC transporter permease | - |
| H1W91_RS01910 (STHERMO_0394) | - | 348862..349812 (+) | 951 | WP_096811862.1 | branched-chain amino acid ABC transporter permease | - |
| H1W91_RS01915 (STHERMO_0395) | - | 349815..350579 (+) | 765 | WP_180476779.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21577.62 Da Isoelectric Point: 4.4829
>NTDB_id=1131568 H1W91_RS01885 WP_002949732.1 345198..345788(+) (clpP) [Streptococcus thermophilus isolate STH_CIRM_1050]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPIEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNNLEQILADNSGQ
PIEKVHVDAERDNWMSAQETLEYGFIDEIMTNNQLK
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPIEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNNLEQILADNSGQ
PIEKVHVDAERDNWMSAQETLEYGFIDEIMTNNQLK
Nucleotide
Download Length: 591 bp
>NTDB_id=1131568 H1W91_RS01885 WP_002949732.1 345198..345788(+) (clpP) [Streptococcus thermophilus isolate STH_CIRM_1050]
ATGATTCCGGTAGTTATTGAACAAACATCACGTGGTGAACGTTCTTATGACATTTACTCACGTTTGCTCAAGGATCGTAT
TATCATGTTAACAGGTCCTATAGAAGATAATATGGCAAACTCAATTATCGCTCAACTCTTGTTCTTGGATGCTCAAGACA
ATACAAAAGATATCTATCTGTATGTTAATACACCTGGTGGGTCAGTTTCAGCAGGCCTTGCCATTGTTGATACAATGAAC
TTCATCAAGTCTGATGTTCAAACCATCGTTATGGGGATGGCAGCATCAATGGGTACAATTATCGCTTCAAGCGGTACCAA
AGGTAAACGTTTCATGTTGCCAAATGCAGAATACATGATTCACCAACCAATGGGTGGTACTGGTGGTGGTACTCAACAAA
CAGATATGGCTATCGCTGCTGAACACTTGCTCAAGACTCGTAATAACTTGGAGCAAATCTTGGCTGATAATTCTGGTCAG
CCAATTGAAAAGGTTCATGTCGATGCTGAACGTGATAATTGGATGAGTGCCCAAGAAACACTTGAATATGGCTTCATTGA
TGAAATCATGACCAACAACCAATTAAAATAA
ATGATTCCGGTAGTTATTGAACAAACATCACGTGGTGAACGTTCTTATGACATTTACTCACGTTTGCTCAAGGATCGTAT
TATCATGTTAACAGGTCCTATAGAAGATAATATGGCAAACTCAATTATCGCTCAACTCTTGTTCTTGGATGCTCAAGACA
ATACAAAAGATATCTATCTGTATGTTAATACACCTGGTGGGTCAGTTTCAGCAGGCCTTGCCATTGTTGATACAATGAAC
TTCATCAAGTCTGATGTTCAAACCATCGTTATGGGGATGGCAGCATCAATGGGTACAATTATCGCTTCAAGCGGTACCAA
AGGTAAACGTTTCATGTTGCCAAATGCAGAATACATGATTCACCAACCAATGGGTGGTACTGGTGGTGGTACTCAACAAA
CAGATATGGCTATCGCTGCTGAACACTTGCTCAAGACTCGTAATAACTTGGAGCAAATCTTGGCTGATAATTCTGGTCAG
CCAATTGAAAAGGTTCATGTCGATGCTGAACGTGATAATTGGATGAGTGCCCAAGAAACACTTGAATATGGCTTCATTGA
TGAAATCATGACCAACAACCAATTAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Streptococcus thermophilus LMG 18311 |
100 |
100 |
1 |
| clpP | Streptococcus thermophilus LMD-9 |
100 |
100 |
1 |
| clpP | Streptococcus pneumoniae D39 |
92.821 |
99.49 |
0.923 |
| clpP | Streptococcus pneumoniae R6 |
92.821 |
99.49 |
0.923 |
| clpP | Streptococcus pneumoniae TIGR4 |
92.821 |
99.49 |
0.923 |
| clpP | Streptococcus pneumoniae Rx1 |
92.821 |
99.49 |
0.923 |
| clpP | Streptococcus pyogenes MGAS315 |
89.796 |
100 |
0.898 |
| clpP | Streptococcus pyogenes JRS4 |
89.796 |
100 |
0.898 |
| clpP | Streptococcus mutans UA159 |
87.755 |
100 |
0.878 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
87.245 |
100 |
0.872 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
86.735 |
100 |
0.867 |
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
59.184 |
100 |
0.592 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
58.549 |
98.469 |
0.577 |