Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | H1W98_RS01910 | Genome accession | NZ_LR822026 |
| Coordinates | 361927..362517 (+) | Length | 196 a.a. |
| NCBI ID | WP_179972639.1 | Uniprot ID | - |
| Organism | Streptococcus thermophilus isolate STH_CIRM_967 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 356927..367517
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H1W98_RS01880 | - | 357300..357916 (+) | 617 | Protein_331 | cation transporting ATPase C-terminal domain-containing protein | - |
| H1W98_RS01885 (STHERMO_0397) | - | 358196..359290 (+) | 1095 | WP_180482237.1 | cystathionine gamma-synthase | - |
| H1W98_RS01890 (STHERMO_0398) | - | 359301..360464 (+) | 1164 | WP_179972635.1 | MalY/PatB family protein | - |
| H1W98_RS01895 (STHERMO_0399) | - | 360540..360707 (+) | 168 | WP_180482236.1 | levansucrase | - |
| H1W98_RS01900 (STHERMO_0400) | - | 360748..361023 (+) | 276 | WP_179972637.1 | hypothetical protein | - |
| H1W98_RS01905 (STHERMO_0401) | upp | 361155..361784 (+) | 630 | WP_179972638.1 | uracil phosphoribosyltransferase | - |
| H1W98_RS01910 (STHERMO_0402) | clpP | 361927..362517 (+) | 591 | WP_179972639.1 | ATP-dependent Clp protease proteolytic subunit | Regulator |
| H1W98_RS01915 (STHERMO_0403) | - | 362604..363053 (+) | 450 | WP_179972640.1 | YlbF family regulator | - |
| H1W98_RS01920 (STHERMO_0404) | - | 363046..363330 (+) | 285 | WP_179972641.1 | YlbG family protein | - |
| H1W98_RS01925 (STHERMO_0405) | - | 363485..364660 (+) | 1176 | WP_179972642.1 | ABC transporter substrate-binding protein | - |
| H1W98_RS01930 (STHERMO_0406) | - | 364704..365588 (+) | 885 | WP_179972643.1 | branched-chain amino acid ABC transporter permease | - |
| H1W98_RS01935 (STHERMO_0407) | - | 365592..366542 (+) | 951 | WP_179972644.1 | branched-chain amino acid ABC transporter permease | - |
| H1W98_RS01940 (STHERMO_0408) | - | 366545..367309 (+) | 765 | WP_002949740.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21559.59 Da Isoelectric Point: 4.4829
>NTDB_id=1131265 H1W98_RS01910 WP_179972639.1 361927..362517(+) (clpP) [Streptococcus thermophilus isolate STH_CIRM_967]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPIEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDLAIAAEHLLKTRNNLEQILADNSGQ
PIEKVHVDAERDNWMSAQETLEYGFIDEIMTNNQLK
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPIEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDLAIAAEHLLKTRNNLEQILADNSGQ
PIEKVHVDAERDNWMSAQETLEYGFIDEIMTNNQLK
Nucleotide
Download Length: 591 bp
>NTDB_id=1131265 H1W98_RS01910 WP_179972639.1 361927..362517(+) (clpP) [Streptococcus thermophilus isolate STH_CIRM_967]
ATGATTCCGGTAGTTATTGAACAAACATCACGTGGTGAACGTTCTTATGACATTTACTCACGTTTGCTCAAGGATCGTAT
TATCATGTTAACAGGTCCTATAGAAGATAATATGGCAAACTCAATTATCGCTCAACTCTTGTTCTTGGATGCTCAAGACA
ATACAAAAGATATCTATCTGTATGTTAATACACCTGGTGGGTCAGTTTCAGCAGGCCTTGCCATTGTTGATACAATGAAC
TTCATCAAGTCTGATGTTCAAACCATCGTTATGGGGATGGCAGCATCAATGGGTACAATTATCGCTTCAAGCGGTACCAA
AGGTAAACGTTTCATGTTGCCAAATGCAGAATACATGATTCACCAACCAATGGGTGGTACTGGTGGTGGTACTCAACAAA
CAGATTTGGCTATCGCTGCTGAACACTTGCTCAAGACTCGTAATAACTTGGAGCAAATCTTGGCTGATAATTCTGGTCAG
CCTATTGAAAAGGTTCATGTTGATGCTGAACGTGATAATTGGATGAGTGCCCAAGAAACACTTGAATATGGCTTCATTGA
TGAAATCATGACCAACAACCAATTAAAATAA
ATGATTCCGGTAGTTATTGAACAAACATCACGTGGTGAACGTTCTTATGACATTTACTCACGTTTGCTCAAGGATCGTAT
TATCATGTTAACAGGTCCTATAGAAGATAATATGGCAAACTCAATTATCGCTCAACTCTTGTTCTTGGATGCTCAAGACA
ATACAAAAGATATCTATCTGTATGTTAATACACCTGGTGGGTCAGTTTCAGCAGGCCTTGCCATTGTTGATACAATGAAC
TTCATCAAGTCTGATGTTCAAACCATCGTTATGGGGATGGCAGCATCAATGGGTACAATTATCGCTTCAAGCGGTACCAA
AGGTAAACGTTTCATGTTGCCAAATGCAGAATACATGATTCACCAACCAATGGGTGGTACTGGTGGTGGTACTCAACAAA
CAGATTTGGCTATCGCTGCTGAACACTTGCTCAAGACTCGTAATAACTTGGAGCAAATCTTGGCTGATAATTCTGGTCAG
CCTATTGAAAAGGTTCATGTTGATGCTGAACGTGATAATTGGATGAGTGCCCAAGAAACACTTGAATATGGCTTCATTGA
TGAAATCATGACCAACAACCAATTAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Streptococcus thermophilus LMG 18311 |
99.49 |
100 |
0.995 |
| clpP | Streptococcus thermophilus LMD-9 |
99.49 |
100 |
0.995 |
| clpP | Streptococcus pneumoniae D39 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pneumoniae R6 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pneumoniae TIGR4 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pneumoniae Rx1 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pyogenes MGAS315 |
89.286 |
100 |
0.893 |
| clpP | Streptococcus pyogenes JRS4 |
89.286 |
100 |
0.893 |
| clpP | Streptococcus mutans UA159 |
87.245 |
100 |
0.872 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
86.735 |
100 |
0.867 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
86.224 |
100 |
0.862 |
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
59.184 |
100 |
0.592 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
58.549 |
98.469 |
0.577 |