Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | H1X08_RS08080 | Genome accession | NZ_LR822025 |
| Coordinates | 1573265..1573855 (-) | Length | 196 a.a. |
| NCBI ID | WP_179972639.1 | Uniprot ID | - |
| Organism | Streptococcus thermophilus isolate STH_CIRM_961 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1568265..1578855
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H1X08_RS08050 (STHERMO_1842) | - | 1568473..1569237 (-) | 765 | WP_002949740.1 | ABC transporter ATP-binding protein | - |
| H1X08_RS08055 (STHERMO_1843) | - | 1569240..1570190 (-) | 951 | WP_179972644.1 | branched-chain amino acid ABC transporter permease | - |
| H1X08_RS08060 (STHERMO_1844) | - | 1570194..1571078 (-) | 885 | WP_179972643.1 | branched-chain amino acid ABC transporter permease | - |
| H1X08_RS08065 (STHERMO_1845) | - | 1571122..1572297 (-) | 1176 | WP_179972642.1 | ABC transporter substrate-binding protein | - |
| H1X08_RS08070 (STHERMO_1846) | - | 1572452..1572736 (-) | 285 | WP_179972641.1 | YlbG family protein | - |
| H1X08_RS08075 (STHERMO_1847) | - | 1572729..1573178 (-) | 450 | WP_179972640.1 | YlbF family regulator | - |
| H1X08_RS08080 (STHERMO_1848) | clpP | 1573265..1573855 (-) | 591 | WP_179972639.1 | ATP-dependent Clp protease proteolytic subunit | Regulator |
| H1X08_RS08085 (STHERMO_1849) | upp | 1573998..1574627 (-) | 630 | WP_179972638.1 | uracil phosphoribosyltransferase | - |
| H1X08_RS08090 (STHERMO_1850) | - | 1574759..1575034 (-) | 276 | WP_179972637.1 | hypothetical protein | - |
| H1X08_RS08095 (STHERMO_1851) | - | 1575075..1575242 (-) | 168 | WP_180482236.1 | levansucrase | - |
| H1X08_RS08100 (STHERMO_1852) | - | 1575318..1576481 (-) | 1164 | WP_179972635.1 | MalY/PatB family protein | - |
| H1X08_RS08105 (STHERMO_1853) | - | 1576492..1577586 (-) | 1095 | WP_180482237.1 | cystathionine gamma-synthase | - |
| H1X08_RS08110 | - | 1577866..1578482 (-) | 617 | Protein_1559 | cation transporting ATPase C-terminal domain-containing protein | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21559.59 Da Isoelectric Point: 4.4829
>NTDB_id=1131226 H1X08_RS08080 WP_179972639.1 1573265..1573855(-) (clpP) [Streptococcus thermophilus isolate STH_CIRM_961]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPIEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDLAIAAEHLLKTRNNLEQILADNSGQ
PIEKVHVDAERDNWMSAQETLEYGFIDEIMTNNQLK
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPIEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDLAIAAEHLLKTRNNLEQILADNSGQ
PIEKVHVDAERDNWMSAQETLEYGFIDEIMTNNQLK
Nucleotide
Download Length: 591 bp
>NTDB_id=1131226 H1X08_RS08080 WP_179972639.1 1573265..1573855(-) (clpP) [Streptococcus thermophilus isolate STH_CIRM_961]
ATGATTCCGGTAGTTATTGAACAAACATCACGTGGTGAACGTTCTTATGACATTTACTCACGTTTGCTCAAGGATCGTAT
TATCATGTTAACAGGTCCTATAGAAGATAATATGGCAAACTCAATTATCGCTCAACTCTTGTTCTTGGATGCTCAAGACA
ATACAAAAGATATCTATCTGTATGTTAATACACCTGGTGGGTCAGTTTCAGCAGGCCTTGCCATTGTTGATACAATGAAC
TTCATCAAGTCTGATGTTCAAACCATCGTTATGGGGATGGCAGCATCAATGGGTACAATTATCGCTTCAAGCGGTACCAA
AGGTAAACGTTTCATGTTGCCAAATGCAGAATACATGATTCACCAACCAATGGGTGGTACTGGTGGTGGTACTCAACAAA
CAGATTTGGCTATCGCTGCTGAACACTTGCTCAAGACTCGTAATAACTTGGAGCAAATCTTGGCTGATAATTCTGGTCAG
CCTATTGAAAAGGTTCATGTTGATGCTGAACGTGATAATTGGATGAGTGCCCAAGAAACACTTGAATATGGCTTCATTGA
TGAAATCATGACCAACAACCAATTAAAATAA
ATGATTCCGGTAGTTATTGAACAAACATCACGTGGTGAACGTTCTTATGACATTTACTCACGTTTGCTCAAGGATCGTAT
TATCATGTTAACAGGTCCTATAGAAGATAATATGGCAAACTCAATTATCGCTCAACTCTTGTTCTTGGATGCTCAAGACA
ATACAAAAGATATCTATCTGTATGTTAATACACCTGGTGGGTCAGTTTCAGCAGGCCTTGCCATTGTTGATACAATGAAC
TTCATCAAGTCTGATGTTCAAACCATCGTTATGGGGATGGCAGCATCAATGGGTACAATTATCGCTTCAAGCGGTACCAA
AGGTAAACGTTTCATGTTGCCAAATGCAGAATACATGATTCACCAACCAATGGGTGGTACTGGTGGTGGTACTCAACAAA
CAGATTTGGCTATCGCTGCTGAACACTTGCTCAAGACTCGTAATAACTTGGAGCAAATCTTGGCTGATAATTCTGGTCAG
CCTATTGAAAAGGTTCATGTTGATGCTGAACGTGATAATTGGATGAGTGCCCAAGAAACACTTGAATATGGCTTCATTGA
TGAAATCATGACCAACAACCAATTAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Streptococcus thermophilus LMG 18311 |
99.49 |
100 |
0.995 |
| clpP | Streptococcus thermophilus LMD-9 |
99.49 |
100 |
0.995 |
| clpP | Streptococcus pneumoniae D39 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pneumoniae R6 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pneumoniae TIGR4 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pneumoniae Rx1 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pyogenes MGAS315 |
89.286 |
100 |
0.893 |
| clpP | Streptococcus pyogenes JRS4 |
89.286 |
100 |
0.893 |
| clpP | Streptococcus mutans UA159 |
87.245 |
100 |
0.872 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
86.735 |
100 |
0.867 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
86.224 |
100 |
0.862 |
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
59.184 |
100 |
0.592 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
58.549 |
98.469 |
0.577 |