Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | H0513_RS02115 | Genome accession | NZ_LR822023 |
| Coordinates | 387809..388399 (+) | Length | 196 a.a. |
| NCBI ID | WP_179972639.1 | Uniprot ID | - |
| Organism | Streptococcus thermophilus isolate STH_CIRM_368 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 382809..393399
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H0513_RS02085 | - | 383183..383799 (+) | 617 | Protein_356 | cation transporting ATPase C-terminal domain-containing protein | - |
| H0513_RS02090 (STHERMO_0426) | - | 384079..385173 (+) | 1095 | WP_179972634.1 | cystathionine gamma-synthase | - |
| H0513_RS02095 (STHERMO_0427) | - | 385184..386347 (+) | 1164 | WP_179972635.1 | MalY/PatB family protein | - |
| H0513_RS02100 (STHERMO_0428) | - | 386423..386590 (+) | 168 | WP_179972636.1 | levansucrase | - |
| H0513_RS02105 (STHERMO_0429) | - | 386631..386906 (+) | 276 | WP_179972637.1 | hypothetical protein | - |
| H0513_RS02110 (STHERMO_0430) | upp | 387038..387667 (+) | 630 | WP_179972638.1 | uracil phosphoribosyltransferase | - |
| H0513_RS02115 (STHERMO_0431) | clpP | 387809..388399 (+) | 591 | WP_179972639.1 | ATP-dependent Clp protease proteolytic subunit | Regulator |
| H0513_RS02120 (STHERMO_0432) | - | 388486..388935 (+) | 450 | WP_179972640.1 | YlbF family regulator | - |
| H0513_RS02125 (STHERMO_0433) | - | 388928..389212 (+) | 285 | WP_179972641.1 | YlbG family protein | - |
| H0513_RS02130 (STHERMO_0434) | - | 389367..390542 (+) | 1176 | WP_179972642.1 | ABC transporter substrate-binding protein | - |
| H0513_RS02135 (STHERMO_0435) | - | 390586..391470 (+) | 885 | WP_179972643.1 | branched-chain amino acid ABC transporter permease | - |
| H0513_RS02140 (STHERMO_0436) | - | 391474..392424 (+) | 951 | WP_179972644.1 | branched-chain amino acid ABC transporter permease | - |
| H0513_RS02145 (STHERMO_0437) | - | 392427..393191 (+) | 765 | WP_002949740.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21559.59 Da Isoelectric Point: 4.4829
>NTDB_id=1131137 H0513_RS02115 WP_179972639.1 387809..388399(+) (clpP) [Streptococcus thermophilus isolate STH_CIRM_368]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPIEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDLAIAAEHLLKTRNNLEQILADNSGQ
PIEKVHVDAERDNWMSAQETLEYGFIDEIMTNNQLK
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPIEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDLAIAAEHLLKTRNNLEQILADNSGQ
PIEKVHVDAERDNWMSAQETLEYGFIDEIMTNNQLK
Nucleotide
Download Length: 591 bp
>NTDB_id=1131137 H0513_RS02115 WP_179972639.1 387809..388399(+) (clpP) [Streptococcus thermophilus isolate STH_CIRM_368]
ATGATTCCGGTAGTTATTGAACAAACATCACGTGGTGAACGTTCTTATGACATTTACTCACGTTTGCTCAAGGATCGTAT
TATCATGTTAACAGGTCCTATAGAAGATAATATGGCAAACTCAATTATCGCTCAACTCTTGTTCTTGGATGCTCAAGACA
ATACAAAAGATATCTATCTGTATGTTAATACACCTGGTGGGTCAGTTTCAGCAGGCCTTGCCATTGTTGATACAATGAAC
TTCATCAAGTCTGATGTTCAAACCATCGTTATGGGGATGGCAGCATCAATGGGTACAATTATCGCTTCAAGCGGTACCAA
AGGTAAACGTTTCATGTTGCCAAATGCAGAATACATGATTCACCAACCAATGGGTGGTACTGGTGGTGGTACTCAACAAA
CAGATTTGGCTATCGCTGCTGAACACTTGCTCAAGACTCGTAATAACTTGGAGCAAATCTTGGCTGATAATTCTGGTCAG
CCTATTGAAAAGGTTCATGTTGATGCTGAACGTGATAATTGGATGAGTGCCCAAGAAACACTTGAATATGGCTTCATTGA
TGAAATCATGACCAACAACCAATTAAAATAA
ATGATTCCGGTAGTTATTGAACAAACATCACGTGGTGAACGTTCTTATGACATTTACTCACGTTTGCTCAAGGATCGTAT
TATCATGTTAACAGGTCCTATAGAAGATAATATGGCAAACTCAATTATCGCTCAACTCTTGTTCTTGGATGCTCAAGACA
ATACAAAAGATATCTATCTGTATGTTAATACACCTGGTGGGTCAGTTTCAGCAGGCCTTGCCATTGTTGATACAATGAAC
TTCATCAAGTCTGATGTTCAAACCATCGTTATGGGGATGGCAGCATCAATGGGTACAATTATCGCTTCAAGCGGTACCAA
AGGTAAACGTTTCATGTTGCCAAATGCAGAATACATGATTCACCAACCAATGGGTGGTACTGGTGGTGGTACTCAACAAA
CAGATTTGGCTATCGCTGCTGAACACTTGCTCAAGACTCGTAATAACTTGGAGCAAATCTTGGCTGATAATTCTGGTCAG
CCTATTGAAAAGGTTCATGTTGATGCTGAACGTGATAATTGGATGAGTGCCCAAGAAACACTTGAATATGGCTTCATTGA
TGAAATCATGACCAACAACCAATTAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Streptococcus thermophilus LMG 18311 |
99.49 |
100 |
0.995 |
| clpP | Streptococcus thermophilus LMD-9 |
99.49 |
100 |
0.995 |
| clpP | Streptococcus pneumoniae D39 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pneumoniae R6 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pneumoniae TIGR4 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pneumoniae Rx1 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pyogenes MGAS315 |
89.286 |
100 |
0.893 |
| clpP | Streptococcus pyogenes JRS4 |
89.286 |
100 |
0.893 |
| clpP | Streptococcus mutans UA159 |
87.245 |
100 |
0.872 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
86.735 |
100 |
0.867 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
86.224 |
100 |
0.862 |
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
59.184 |
100 |
0.592 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
58.549 |
98.469 |
0.577 |