Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | H0514_RS08295 | Genome accession | NZ_LR822020 |
| Coordinates | 1610717..1611307 (-) | Length | 196 a.a. |
| NCBI ID | WP_179972639.1 | Uniprot ID | - |
| Organism | Streptococcus thermophilus isolate STH_CIRM_956 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1605717..1616307
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H0514_RS08265 (STHERMO_1902) | - | 1605925..1606689 (-) | 765 | WP_002949740.1 | ABC transporter ATP-binding protein | - |
| H0514_RS08270 (STHERMO_1903) | - | 1606692..1607642 (-) | 951 | WP_179972644.1 | branched-chain amino acid ABC transporter permease | - |
| H0514_RS08275 (STHERMO_1904) | - | 1607646..1608530 (-) | 885 | WP_179972643.1 | branched-chain amino acid ABC transporter permease | - |
| H0514_RS08280 (STHERMO_1905) | - | 1608574..1609749 (-) | 1176 | WP_179972642.1 | ABC transporter substrate-binding protein | - |
| H0514_RS08285 (STHERMO_1906) | - | 1609904..1610188 (-) | 285 | WP_179972641.1 | YlbG family protein | - |
| H0514_RS08290 (STHERMO_1907) | - | 1610181..1610630 (-) | 450 | WP_179972640.1 | YlbF family regulator | - |
| H0514_RS08295 (STHERMO_1908) | clpP | 1610717..1611307 (-) | 591 | WP_179972639.1 | ATP-dependent Clp protease proteolytic subunit | Regulator |
| H0514_RS08300 (STHERMO_1909) | upp | 1611449..1612078 (-) | 630 | WP_179972638.1 | uracil phosphoribosyltransferase | - |
| H0514_RS08305 (STHERMO_1910) | - | 1612210..1612485 (-) | 276 | WP_179972637.1 | hypothetical protein | - |
| H0514_RS08310 (STHERMO_1911) | - | 1612526..1612693 (-) | 168 | WP_179972636.1 | levansucrase | - |
| H0514_RS08315 (STHERMO_1912) | - | 1612769..1613932 (-) | 1164 | WP_179972635.1 | MalY/PatB family protein | - |
| H0514_RS08320 (STHERMO_1913) | - | 1613943..1615037 (-) | 1095 | WP_179972634.1 | cystathionine gamma-synthase | - |
| H0514_RS08325 | - | 1615317..1615933 (-) | 617 | Protein_1602 | cation transporting ATPase C-terminal domain-containing protein | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21559.59 Da Isoelectric Point: 4.4829
>NTDB_id=1131108 H0514_RS08295 WP_179972639.1 1610717..1611307(-) (clpP) [Streptococcus thermophilus isolate STH_CIRM_956]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPIEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDLAIAAEHLLKTRNNLEQILADNSGQ
PIEKVHVDAERDNWMSAQETLEYGFIDEIMTNNQLK
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPIEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDLAIAAEHLLKTRNNLEQILADNSGQ
PIEKVHVDAERDNWMSAQETLEYGFIDEIMTNNQLK
Nucleotide
Download Length: 591 bp
>NTDB_id=1131108 H0514_RS08295 WP_179972639.1 1610717..1611307(-) (clpP) [Streptococcus thermophilus isolate STH_CIRM_956]
ATGATTCCGGTAGTTATTGAACAAACATCACGTGGTGAACGTTCTTATGACATTTACTCACGTTTGCTCAAGGATCGTAT
TATCATGTTAACAGGTCCTATAGAAGATAATATGGCAAACTCAATTATCGCTCAACTCTTGTTCTTGGATGCTCAAGACA
ATACAAAAGATATCTATCTGTATGTTAATACACCTGGTGGGTCAGTTTCAGCAGGCCTTGCCATTGTTGATACAATGAAC
TTCATCAAGTCTGATGTTCAAACCATCGTTATGGGGATGGCAGCATCAATGGGTACAATTATCGCTTCAAGCGGTACCAA
AGGTAAACGTTTCATGTTGCCAAATGCAGAATACATGATTCACCAACCAATGGGTGGTACTGGTGGTGGTACTCAACAAA
CAGATTTGGCTATCGCTGCTGAACACTTGCTCAAGACTCGTAATAACTTGGAGCAAATCTTGGCTGATAATTCTGGTCAG
CCTATTGAAAAGGTTCATGTTGATGCTGAACGTGATAATTGGATGAGTGCCCAAGAAACACTTGAATATGGCTTCATTGA
TGAAATCATGACCAACAACCAATTAAAATAA
ATGATTCCGGTAGTTATTGAACAAACATCACGTGGTGAACGTTCTTATGACATTTACTCACGTTTGCTCAAGGATCGTAT
TATCATGTTAACAGGTCCTATAGAAGATAATATGGCAAACTCAATTATCGCTCAACTCTTGTTCTTGGATGCTCAAGACA
ATACAAAAGATATCTATCTGTATGTTAATACACCTGGTGGGTCAGTTTCAGCAGGCCTTGCCATTGTTGATACAATGAAC
TTCATCAAGTCTGATGTTCAAACCATCGTTATGGGGATGGCAGCATCAATGGGTACAATTATCGCTTCAAGCGGTACCAA
AGGTAAACGTTTCATGTTGCCAAATGCAGAATACATGATTCACCAACCAATGGGTGGTACTGGTGGTGGTACTCAACAAA
CAGATTTGGCTATCGCTGCTGAACACTTGCTCAAGACTCGTAATAACTTGGAGCAAATCTTGGCTGATAATTCTGGTCAG
CCTATTGAAAAGGTTCATGTTGATGCTGAACGTGATAATTGGATGAGTGCCCAAGAAACACTTGAATATGGCTTCATTGA
TGAAATCATGACCAACAACCAATTAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Streptococcus thermophilus LMG 18311 |
99.49 |
100 |
0.995 |
| clpP | Streptococcus thermophilus LMD-9 |
99.49 |
100 |
0.995 |
| clpP | Streptococcus pneumoniae D39 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pneumoniae R6 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pneumoniae TIGR4 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pneumoniae Rx1 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pyogenes MGAS315 |
89.286 |
100 |
0.893 |
| clpP | Streptococcus pyogenes JRS4 |
89.286 |
100 |
0.893 |
| clpP | Streptococcus mutans UA159 |
87.245 |
100 |
0.872 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
86.735 |
100 |
0.867 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
86.224 |
100 |
0.862 |
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
59.184 |
100 |
0.592 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
58.549 |
98.469 |
0.577 |