Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | H0510_RS01830 | Genome accession | NZ_LR822019 |
| Coordinates | 333894..334484 (+) | Length | 196 a.a. |
| NCBI ID | WP_084829364.1 | Uniprot ID | - |
| Organism | Streptococcus thermophilus isolate STH_CIRM_772 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 328894..339484
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H0510_RS01800 (STHERMO_0377) | - | 329273..329866 (+) | 594 | Protein_306 | cation transporting ATPase C-terminal domain-containing protein | - |
| H0510_RS01805 (STHERMO_0378) | - | 330170..331264 (+) | 1095 | WP_179966924.1 | cystathionine gamma-synthase | - |
| H0510_RS01810 (STHERMO_0379) | - | 331275..332438 (+) | 1164 | WP_179966925.1 | MalY/PatB family protein | - |
| H0510_RS01815 (STHERMO_0380) | - | 332514..332681 (+) | 168 | WP_014607986.1 | hypothetical protein | - |
| H0510_RS01820 (STHERMO_0381) | - | 332722..332997 (+) | 276 | WP_084829363.1 | hypothetical protein | - |
| H0510_RS01825 (STHERMO_0382) | upp | 333127..333756 (+) | 630 | WP_002946740.1 | uracil phosphoribosyltransferase | - |
| H0510_RS01830 (STHERMO_0383) | clpP | 333894..334484 (+) | 591 | WP_084829364.1 | ATP-dependent Clp protease proteolytic subunit | Regulator |
| H0510_RS01835 (STHERMO_0384) | - | 334571..335020 (+) | 450 | WP_065972932.1 | YlbF family regulator | - |
| H0510_RS01840 (STHERMO_0385) | - | 335013..335294 (+) | 282 | WP_084829365.1 | YlbG family protein | - |
| H0510_RS01845 (STHERMO_0386) | - | 335451..336626 (+) | 1176 | WP_022096632.1 | ABC transporter substrate-binding protein | - |
| H0510_RS01850 (STHERMO_0387) | - | 336670..337554 (+) | 885 | WP_011225509.1 | branched-chain amino acid ABC transporter permease | - |
| H0510_RS01855 (STHERMO_0388) | - | 337558..338508 (+) | 951 | WP_141326987.1 | branched-chain amino acid ABC transporter permease | - |
| H0510_RS01860 (STHERMO_0389) | - | 338511..339275 (+) | 765 | WP_002947187.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21593.62 Da Isoelectric Point: 4.4829
>NTDB_id=1131014 H0510_RS01830 WP_084829364.1 333894..334484(+) (clpP) [Streptococcus thermophilus isolate STH_CIRM_772]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPIEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSSGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNNLEQILADNSGQ
PIEKVHVDAERDNWMSAQETLEYGFIDEIMTNNQLK
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPIEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSSGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNNLEQILADNSGQ
PIEKVHVDAERDNWMSAQETLEYGFIDEIMTNNQLK
Nucleotide
Download Length: 591 bp
>NTDB_id=1131014 H0510_RS01830 WP_084829364.1 333894..334484(+) (clpP) [Streptococcus thermophilus isolate STH_CIRM_772]
ATGATTCCGGTAGTTATTGAACAAACATCACGTGGTGAACGTTCTTATGACATTTACTCACGTTTGCTCAAGGATCGTAT
TATCATGTTAACAGGTCCTATAGAAGATAATATGGCAAACTCAATTATCGCTCAACTCTTGTTCTTGGATGCTCAAGACA
ATACAAAAGATATCTATCTGTATGTTAATACACCTGGTGGGTCAGTTTCATCAGGCCTTGCCATTGTTGATACAATGAAC
TTCATCAAGTCTGATGTTCAAACCATCGTTATGGGGATGGCAGCATCAATGGGGACAATTATCGCTTCAAGCGGTACCAA
AGGTAAACGTTTCATGTTGCCAAATGCAGAATACATGATTCACCAACCAATGGGTGGTACTGGTGGTGGTACTCAACAAA
CAGATATGGCTATCGCTGCTGAACACTTGCTCAAGACTCGTAATAACTTGGAGCAAATCTTGGCTGATAATTCTGGTCAG
CCAATTGAAAAGGTTCATGTCGATGCTGAACGTGATAATTGGATGAGTGCCCAAGAAACACTTGAATATGGCTTCATTGA
TGAAATCATGACCAACAACCAATTAAAATAA
ATGATTCCGGTAGTTATTGAACAAACATCACGTGGTGAACGTTCTTATGACATTTACTCACGTTTGCTCAAGGATCGTAT
TATCATGTTAACAGGTCCTATAGAAGATAATATGGCAAACTCAATTATCGCTCAACTCTTGTTCTTGGATGCTCAAGACA
ATACAAAAGATATCTATCTGTATGTTAATACACCTGGTGGGTCAGTTTCATCAGGCCTTGCCATTGTTGATACAATGAAC
TTCATCAAGTCTGATGTTCAAACCATCGTTATGGGGATGGCAGCATCAATGGGGACAATTATCGCTTCAAGCGGTACCAA
AGGTAAACGTTTCATGTTGCCAAATGCAGAATACATGATTCACCAACCAATGGGTGGTACTGGTGGTGGTACTCAACAAA
CAGATATGGCTATCGCTGCTGAACACTTGCTCAAGACTCGTAATAACTTGGAGCAAATCTTGGCTGATAATTCTGGTCAG
CCAATTGAAAAGGTTCATGTCGATGCTGAACGTGATAATTGGATGAGTGCCCAAGAAACACTTGAATATGGCTTCATTGA
TGAAATCATGACCAACAACCAATTAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Streptococcus thermophilus LMG 18311 |
99.49 |
100 |
0.995 |
| clpP | Streptococcus thermophilus LMD-9 |
99.49 |
100 |
0.995 |
| clpP | Streptococcus pneumoniae D39 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pneumoniae R6 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pneumoniae TIGR4 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pneumoniae Rx1 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pyogenes MGAS315 |
89.286 |
100 |
0.893 |
| clpP | Streptococcus pyogenes JRS4 |
89.286 |
100 |
0.893 |
| clpP | Streptococcus mutans UA159 |
87.245 |
100 |
0.872 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
86.735 |
100 |
0.867 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
86.224 |
100 |
0.862 |
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
58.673 |
100 |
0.587 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
59.067 |
98.469 |
0.582 |