Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | H0511_RS01865 | Genome accession | NZ_LR822017 |
| Coordinates | 349090..349680 (+) | Length | 196 a.a. |
| NCBI ID | WP_179972639.1 | Uniprot ID | - |
| Organism | Streptococcus thermophilus isolate STH_CIRM_336 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 344090..354680
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H0511_RS01835 | - | 344452..345094 (+) | 643 | Protein_316 | cation transporting ATPase C-terminal domain-containing protein | - |
| H0511_RS01840 (STHERMO_0373) | - | 345360..346454 (+) | 1095 | WP_179974249.1 | cystathionine gamma-synthase | - |
| H0511_RS01845 (STHERMO_0374) | - | 346465..347628 (+) | 1164 | WP_179974250.1 | MalY/PatB family protein | - |
| H0511_RS01850 (STHERMO_0375) | - | 347704..347871 (+) | 168 | WP_179972636.1 | levansucrase | - |
| H0511_RS01855 (STHERMO_0376) | - | 347913..348188 (+) | 276 | WP_179972637.1 | hypothetical protein | - |
| H0511_RS01860 (STHERMO_0377) | upp | 348320..348949 (+) | 630 | WP_179972638.1 | uracil phosphoribosyltransferase | - |
| H0511_RS01865 (STHERMO_0378) | clpP | 349090..349680 (+) | 591 | WP_179972639.1 | ATP-dependent Clp protease proteolytic subunit | Regulator |
| H0511_RS01870 (STHERMO_0379) | - | 349767..350216 (+) | 450 | WP_179974251.1 | YlbF family regulator | - |
| H0511_RS01875 (STHERMO_0380) | - | 350209..350490 (+) | 282 | WP_002949736.1 | YlbG family protein | - |
| H0511_RS01880 (STHERMO_0381) | - | 350647..351822 (+) | 1176 | WP_084828507.1 | ABC transporter substrate-binding protein | - |
| H0511_RS01885 (STHERMO_0382) | - | 351866..352750 (+) | 885 | WP_011225509.1 | branched-chain amino acid ABC transporter permease | - |
| H0511_RS01890 (STHERMO_0383) | - | 352754..353704 (+) | 951 | WP_011225510.1 | branched-chain amino acid ABC transporter permease | - |
| H0511_RS01895 (STHERMO_0384) | - | 353707..354471 (+) | 765 | WP_002949740.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21559.59 Da Isoelectric Point: 4.4829
>NTDB_id=1130955 H0511_RS01865 WP_179972639.1 349090..349680(+) (clpP) [Streptococcus thermophilus isolate STH_CIRM_336]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPIEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDLAIAAEHLLKTRNNLEQILADNSGQ
PIEKVHVDAERDNWMSAQETLEYGFIDEIMTNNQLK
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPIEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDLAIAAEHLLKTRNNLEQILADNSGQ
PIEKVHVDAERDNWMSAQETLEYGFIDEIMTNNQLK
Nucleotide
Download Length: 591 bp
>NTDB_id=1130955 H0511_RS01865 WP_179972639.1 349090..349680(+) (clpP) [Streptococcus thermophilus isolate STH_CIRM_336]
ATGATTCCGGTAGTTATTGAACAAACATCACGTGGTGAACGTTCTTATGACATTTACTCACGTTTGCTCAAGGATCGTAT
TATCATGTTAACAGGTCCTATAGAAGATAATATGGCAAACTCAATTATCGCTCAACTCTTGTTCTTGGATGCTCAAGACA
ATACAAAAGATATCTATCTGTATGTTAATACACCTGGTGGGTCAGTTTCAGCAGGCCTTGCCATTGTTGATACAATGAAC
TTCATCAAGTCTGATGTTCAAACCATCGTTATGGGGATGGCAGCATCAATGGGTACAATTATCGCTTCAAGCGGTACCAA
AGGTAAACGTTTCATGTTGCCAAATGCAGAATACATGATTCACCAACCAATGGGTGGTACTGGTGGTGGTACTCAACAAA
CAGATTTGGCTATCGCTGCTGAACACTTGCTCAAGACTCGTAATAACTTGGAGCAAATCTTGGCTGATAATTCTGGTCAG
CCTATTGAAAAGGTTCATGTTGATGCTGAACGTGATAATTGGATGAGTGCCCAAGAAACACTTGAATATGGCTTCATTGA
TGAAATCATGACCAACAACCAATTAAAATAA
ATGATTCCGGTAGTTATTGAACAAACATCACGTGGTGAACGTTCTTATGACATTTACTCACGTTTGCTCAAGGATCGTAT
TATCATGTTAACAGGTCCTATAGAAGATAATATGGCAAACTCAATTATCGCTCAACTCTTGTTCTTGGATGCTCAAGACA
ATACAAAAGATATCTATCTGTATGTTAATACACCTGGTGGGTCAGTTTCAGCAGGCCTTGCCATTGTTGATACAATGAAC
TTCATCAAGTCTGATGTTCAAACCATCGTTATGGGGATGGCAGCATCAATGGGTACAATTATCGCTTCAAGCGGTACCAA
AGGTAAACGTTTCATGTTGCCAAATGCAGAATACATGATTCACCAACCAATGGGTGGTACTGGTGGTGGTACTCAACAAA
CAGATTTGGCTATCGCTGCTGAACACTTGCTCAAGACTCGTAATAACTTGGAGCAAATCTTGGCTGATAATTCTGGTCAG
CCTATTGAAAAGGTTCATGTTGATGCTGAACGTGATAATTGGATGAGTGCCCAAGAAACACTTGAATATGGCTTCATTGA
TGAAATCATGACCAACAACCAATTAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Streptococcus thermophilus LMG 18311 |
99.49 |
100 |
0.995 |
| clpP | Streptococcus thermophilus LMD-9 |
99.49 |
100 |
0.995 |
| clpP | Streptococcus pneumoniae D39 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pneumoniae R6 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pneumoniae TIGR4 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pneumoniae Rx1 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pyogenes MGAS315 |
89.286 |
100 |
0.893 |
| clpP | Streptococcus pyogenes JRS4 |
89.286 |
100 |
0.893 |
| clpP | Streptococcus mutans UA159 |
87.245 |
100 |
0.872 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
86.735 |
100 |
0.867 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
86.224 |
100 |
0.862 |
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
59.184 |
100 |
0.592 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
58.549 |
98.469 |
0.577 |