Detailed information NTG1129602

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: GPW69_RS07210
• Genome accession: NZ_LR738724
• Coordinates: 1458505..1459116 (-)
• Length: 203 a.a.
• NCBI ID: WP_223375679.1
• Uniprot ID: -
• Organism: Streptococcus suis isolate 9401240
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1453505..1464116

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GPW69_RS07185	-	1454003..1454767 (-)	765	WP_024384876.1	ABC transporter ATP-binding protein	-
GPW69_RS07190	-	1454767..1455714 (-)	948	WP_002937293.1	branched-chain amino acid ABC transporter permease	-
GPW69_RS07195	-	1455717..1456604 (-)	888	WP_012027482.1	branched-chain amino acid ABC transporter permease	-
GPW69_RS07200	-	1456805..1457974 (-)	1170	WP_024384877.1	ABC transporter substrate-binding protein	-
GPW69_RS07205	-	1458106..1458378 (-)	273	WP_014638365.1	YlbG family protein	-
GPW69_RS07210	clpP	1458505..1459116 (-)	612	WP_223375679.1	ATP-dependent Clp protease proteolytic subunit	Regulator
GPW69_RS07215	upp	1459218..1459847 (-)	630	WP_012027487.1	uracil phosphoribosyltransferase	-
GPW69_RS07220	-	1459927..1461543 (-)	1617	WP_074391812.1	glycoside hydrolase family 13 protein	-
GPW69_RS07225	gtfA	1461617..1463065 (-)	1449	WP_044771698.1	sucrose phosphorylase	-
GPW69_RS07230	-	1463136..1463966 (-)	831	WP_074391811.1	carbohydrate ABC transporter permease	-

Sequence

Protein

• Length: 203 a.a.
• Molecular weight: 22345.73 Da
• Isoelectric Point: 6.7324

>NTDB_id=1129602 GPW69_RS07210 WP_223375679.1 1458505..1459116(-) (clpP) [Streptococcus suis isolate 9401240]
MSKRSNFMIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDPTKDIYLYVNTPGGSVSAGL
AIVDTMNFIKADVQTIVMGTAASMGTIIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNKLEKI
LADNSGKTVKQIHKDAERDYWMSAEETLAYGFIDQIMDNTKVK

Nucleotide

• Length: 612 bp

>NTDB_id=1129602 GPW69_RS07210 WP_223375679.1 1458505..1459116(-) (clpP) [Streptococcus suis isolate 9401240]
ATCTCGAAAAGGAGTAATTTTATGATTCCAGTAGTTATTGAACAAACTAGCCGTGGTGAGCGCTCGTATGATATTTATTC
CCGTTTGCTCAAGGATCGCATTATCATGTTGACAGGACCAGTTGAGGACAACATGGCTAATTCGATTATTGCACAATTGC
TTTTCCTTGATGCCCAAGATCCTACAAAGGATATTTACCTCTATGTTAATACGCCAGGGGGATCGGTGTCAGCAGGTCTT
GCCATTGTAGACACGATGAATTTCATTAAAGCTGATGTTCAAACCATCGTTATGGGAACAGCTGCGAGCATGGGAACCAT
CATTGCATCAAGCGGTGCCAAGGGCAAACGTTTCATGTTGCCAAATGCAGAGTACATGATTCACCAACCGATGGGTGGAA
CAGGTGGTGGCACTCAGCAAACAGACATGGCTATTGCAGCAGAACACCTATTAAAAACACGTAATAAGCTAGAAAAAATC
TTGGCAGATAATTCAGGTAAGACAGTCAAGCAAATCCATAAGGATGCAGAACGTGATTACTGGATGTCAGCAGAAGAAAC
CTTGGCTTACGGTTTTATTGACCAGATTATGGACAATACAAAAGTCAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (18-199)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes JRS4	92.347	96.552	0.892
clpP	Streptococcus pyogenes MGAS315	92.347	96.552	0.892
clpP	Streptococcus mutans UA159	90.306	96.552	0.872
clpP	Streptococcus thermophilus LMD-9	88.776	96.552	0.857
clpP	Streptococcus thermophilus LMG 18311	88.776	96.552	0.857
clpP	Streptococcus pneumoniae R6	89.231	96.059	0.857
clpP	Streptococcus pneumoniae Rx1	89.231	96.059	0.857
clpP	Streptococcus pneumoniae D39	89.231	96.059	0.857
clpP	Streptococcus pneumoniae TIGR4	89.231	96.059	0.857
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	83.756	97.044	0.813
clpP	Lactococcus lactis subsp. cremoris KW2	83.249	97.044	0.808
clpP	Bacillus subtilis subsp. subtilis str. 168	58.163	96.552	0.562
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.549	95.074	0.557