Detailed information NTG1128493

Bioinformatically predicted

Overview

• Name: comX/sigX/comX2/sigX2
• Type: Regulator
• Locus tag: FQT45_RS07970
• Genome accession: NZ_LR595858
• Coordinates: 1628194..1628736 (-)
• Length: 180 a.a.
• NCBI ID: WP_077322504.1
• Uniprot ID: -
• Organism: Streptococcus pseudoporcinus strain NCTC10228
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IScluster/Tn	1629304..1630457	1628194..1628736	flank	568

Gene organization within MGE regions

Location: 1628194..1630457

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FQT45_RS07970 (NCTC10228_01638)	comX/sigX/comX2/sigX2	1628194..1628736 (-)	543	WP_077322504.1	sigma-70 family RNA polymerase sigma factor	Regulator
FQT45_RS07975	-	1629058..1630457 (+)	1400	Protein_1520	IS3 family transposase	-

Sequence

Protein

• Length: 180 a.a.
• Molecular weight: 21835.71 Da
• Isoelectric Point: 10.1723

>NTDB_id=1128493 FQT45_RS07970 WP_077322504.1 1628194..1628736(-) (comX/sigX/comX2/sigX2) [Streptococcus pseudoporcinus strain NCTC10228]
MFFFVTFFYNMTIILKEGIIKKPMYELNQLFSQVKPIVFKLMRTYFIQLWETDDWLQEGRLVLYSLIESNPELLTNQKKL
LVYFKTKFSSHIKDTIRHQESFKRKLNRLPYQEISEVSHRIPEKGLILDDFVAYQSIIEELKPYLTMKEQNQFKALLRGE
RFSGRKSLLRKLKPFFIDFQ

Nucleotide

• Length: 543 bp

>NTDB_id=1128493 FQT45_RS07970 WP_077322504.1 1628194..1628736(-) (comX/sigX/comX2/sigX2) [Streptococcus pseudoporcinus strain NCTC10228]
ATGTTCTTTTTTGTAACTTTCTTTTACAATATGACTATCATTTTGAAAGAAGGTATTATTAAAAAGCCTATGTATGAATT
AAATCAACTATTTAGCCAAGTAAAGCCAATTGTTTTTAAGCTAATGCGGACCTATTTTATTCAATTATGGGAAACTGATG
ATTGGCTACAAGAAGGACGTTTAGTTCTATATAGTCTGATCGAAAGTAATCCTGAATTACTAACTAATCAGAAAAAGTTA
CTGGTATATTTTAAAACTAAATTTTCGTCCCATATAAAAGACACCATTCGTCATCAAGAATCTTTCAAACGAAAATTAAA
TCGCTTACCATATCAAGAAATTAGTGAAGTTTCTCATCGGATACCGGAAAAGGGACTCATCCTTGATGATTTTGTTGCTT
ATCAGTCAATTATTGAGGAATTGAAGCCATATTTGACCATGAAAGAACAAAATCAATTTAAAGCATTGCTAAGAGGAGAG
CGCTTTTCTGGACGAAAATCCTTATTGCGTAAGTTAAAGCCTTTCTTTATAGACTTTCAATAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	51.977	98.333	0.511
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	51.977	98.333	0.511
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	51.412	98.333	0.506
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	51.412	98.333	0.506
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	51.412	98.333	0.506
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	51.412	98.333	0.506
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	47.436	86.667	0.411
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	47.333	83.333	0.394
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	47.333	83.333	0.394
comX/sigX	Streptococcus mutans UA159	43.046	83.889	0.361