Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   FGL05_RS06330 Genome accession   NZ_LR594044
Coordinates   1303187..1303372 (-) Length   61 a.a.
NCBI ID   WP_043894982.1    Uniprot ID   -
Organism   Streptococcus lutetiensis strain NCTC8796     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1298187..1308372
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL05_RS06305 (NCTC8796_01340) - 1298555..1298812 (-) 258 WP_006531549.1 YggT family protein -
  FGL05_RS06310 (NCTC8796_01341) - 1298816..1299427 (-) 612 WP_111712663.1 cell division protein SepF -
  FGL05_RS06315 (NCTC8796_01342) - 1299440..1300114 (-) 675 WP_058813713.1 YggS family pyridoxal phosphate-dependent enzyme -
  FGL05_RS06320 (NCTC8796_01343) ftsZ 1300114..1301439 (-) 1326 WP_111698309.1 cell division protein FtsZ -
  FGL05_RS06325 (NCTC8796_01344) ftsA 1301459..1302832 (-) 1374 WP_020916374.1 cell division protein FtsA -
  FGL05_RS06330 (NCTC8796_01345) prx 1303187..1303372 (-) 186 WP_043894982.1 Paratox Regulator
  FGL05_RS06335 (NCTC8796_01346) - 1303629..1304042 (-) 414 WP_233422889.1 hypothetical protein -
  FGL05_RS06340 (NCTC8796_01347) - 1304716..1304919 (-) 204 WP_020916371.1 cold-shock protein -
  FGL05_RS09500 (NCTC8796_01348) - 1305212..1305562 (-) 351 WP_058833193.1 hypothetical protein -
  FGL05_RS09505 (NCTC8796_01349) - 1305572..1305829 (-) 258 WP_058813711.1 hypothetical protein -
  FGL05_RS09510 - 1305831..1306043 (-) 213 WP_020916369.1 hypothetical protein -
  FGL05_RS06360 (NCTC8796_01350) - 1306116..1307069 (+) 954 WP_111712662.1 IS30 family transposase -
  FGL05_RS06365 (NCTC8796_01351) - 1307091..1308326 (-) 1236 WP_020916368.1 FtsQ-type POTRA domain-containing protein -

Sequence

Protein


Download         Length: 61 a.a.        Molecular weight: 7161.24 Da        Isoelectric Point: 4.3466

>NTDB_id=1127682 FGL05_RS06330 WP_043894982.1 1303187..1303372(-) (prx) [Streptococcus lutetiensis strain NCTC8796]
MLYYDELKKAIDRGFITGDTIQIVRKNGIVFDYVLPNEPVKPYEVVTTERVADVLEELKEW

Nucleotide


Download         Length: 186 bp        

>NTDB_id=1127682 FGL05_RS06330 WP_043894982.1 1303187..1303372(-) (prx) [Streptococcus lutetiensis strain NCTC8796]
ATGTTATATTATGATGAACTAAAAAAGGCAATCGATAGAGGCTTTATAACAGGTGATACTATTCAAATTGTGAGAAAGAA
TGGGATAGTATTTGATTATGTTTTACCTAATGAGCCAGTAAAGCCCTATGAGGTAGTTACTACTGAACGAGTAGCAGACG
TTTTGGAAGAGCTAAAAGAATGGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

66.102

96.721

0.639
  prx Streptococcus pyogenes MGAS315

67.241

95.082

0.639
  prx Streptococcus pyogenes MGAS8232

65.517

95.082

0.623
  prx Streptococcus pyogenes MGAS315

63.793

95.082

0.607
  prx Streptococcus pyogenes MGAS315

69.048

68.852

0.475
  prx Streptococcus pyogenes MGAS315

68.293

67.213

0.459
  prx Streptococcus pyogenes MGAS315

65.854

67.213

0.443

Multiple sequence alignment