Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | FGK94_RS08065 | Genome accession | NZ_LR590471 |
| Coordinates | 1704403..1704993 (+) | Length | 196 a.a. |
| NCBI ID | WP_012677455.1 | Uniprot ID | A0A922T644 |
| Organism | Streptococcus equi subsp. zooepidemicus strain NCTC11854 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1699403..1709993
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FGK94_RS08050 (NCTC11854_01647) | - | 1700230..1701675 (-) | 1446 | WP_043030102.1 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase | - |
| FGK94_RS08055 (NCTC11854_01648) | - | 1701761..1703392 (+) | 1632 | WP_043030101.1 | putative polysaccharide biosynthesis protein | - |
| FGK94_RS08060 (NCTC11854_01649) | upp | 1703542..1704171 (+) | 630 | WP_012516202.1 | uracil phosphoribosyltransferase | - |
| FGK94_RS08065 (NCTC11854_01650) | clpP | 1704403..1704993 (+) | 591 | WP_012677455.1 | ATP-dependent Clp protease proteolytic subunit | Regulator |
| FGK94_RS08070 (NCTC11854_01651) | - | 1705088..1705534 (+) | 447 | WP_043030100.1 | YlbF family regulator | - |
| FGK94_RS08075 (NCTC11854_01652) | - | 1705535..1705819 (+) | 285 | WP_012516199.1 | YlbG family protein | - |
| FGK94_RS08080 (NCTC11854_01653) | tmk | 1706133..1706768 (+) | 636 | WP_042671289.1 | dTMP kinase | - |
| FGK94_RS08085 (NCTC11854_01654) | - | 1706782..1707657 (+) | 876 | WP_043030099.1 | DNA polymerase III subunit delta' | - |
| FGK94_RS08090 (NCTC11854_01655) | ricT | 1707654..1708454 (+) | 801 | WP_043030098.1 | regulatory iron-sulfur-containing complex subunit RicT | - |
| FGK94_RS08095 (NCTC11854_01656) | yabA | 1708447..1708770 (+) | 324 | WP_012516195.1 | DNA replication initiation control protein YabA | - |
| FGK94_RS08100 (NCTC11854_01657) | rsmI | 1708775..1709641 (+) | 867 | WP_012516194.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21561.76 Da Isoelectric Point: 5.0281
>NTDB_id=1126899 FGK94_RS08065 WP_012677455.1 1704403..1704993(+) (clpP) [Streptococcus equi subsp. zooepidemicus strain NCTC11854]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK
TIKQIHKDAERDYWMSAEETLAYGFIDEIMENNELA
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK
TIKQIHKDAERDYWMSAEETLAYGFIDEIMENNELA
Nucleotide
Download Length: 591 bp
>NTDB_id=1126899 FGK94_RS08065 WP_012677455.1 1704403..1704993(+) (clpP) [Streptococcus equi subsp. zooepidemicus strain NCTC11854]
ATGATTCCTGTAGTTATTGAACAAACCAGTCGTGGAGAGCGTTCTTATGACATTTATTCACGTCTGTTAAAGGACCGTAT
TATCATGCTGACTGGTCCAGTAGAGGATAATATGGCAAACTCTGTTATTGCGCAGCTCTTGTTTTTAGATGCCCAAGACA
ACACAAAAGACATTTACCTCTATGTGAATACCCCAGGAGGCTCTGTATCAGCTGGTCTAGCTATTGTGGATACGATGAAC
TTTATTAAGGCAGATGTGCAAACCATTGTTATGGGTATGGCTGCCTCTATGGGAACCGTTATTGCTTCATCAGGTGCAAA
GGGCAAGCGCTTTATGCTTCCAAATGCAGAATATATGATTCACCAGCCTATGGGAGGTACAGGAGGTGGTACGCAGCAGA
CGGATATGGCCATTGCTGCTGAGCATTTATTAAAGACACGTCACCGCTTGGAAAAGATTTTGGCACAAAATGCCGGTAAA
ACGATCAAACAAATCCATAAGGACGCTGAGCGTGATTATTGGATGAGCGCAGAAGAAACCCTAGCCTATGGCTTTATTGA
TGAAATCATGGAAAATAATGAGCTAGCTTAG
ATGATTCCTGTAGTTATTGAACAAACCAGTCGTGGAGAGCGTTCTTATGACATTTATTCACGTCTGTTAAAGGACCGTAT
TATCATGCTGACTGGTCCAGTAGAGGATAATATGGCAAACTCTGTTATTGCGCAGCTCTTGTTTTTAGATGCCCAAGACA
ACACAAAAGACATTTACCTCTATGTGAATACCCCAGGAGGCTCTGTATCAGCTGGTCTAGCTATTGTGGATACGATGAAC
TTTATTAAGGCAGATGTGCAAACCATTGTTATGGGTATGGCTGCCTCTATGGGAACCGTTATTGCTTCATCAGGTGCAAA
GGGCAAGCGCTTTATGCTTCCAAATGCAGAATATATGATTCACCAGCCTATGGGAGGTACAGGAGGTGGTACGCAGCAGA
CGGATATGGCCATTGCTGCTGAGCATTTATTAAAGACACGTCACCGCTTGGAAAAGATTTTGGCACAAAATGCCGGTAAA
ACGATCAAACAAATCCATAAGGACGCTGAGCGTGATTATTGGATGAGCGCAGAAGAAACCCTAGCCTATGGCTTTATTGA
TGAAATCATGGAAAATAATGAGCTAGCTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Streptococcus pyogenes MGAS315 |
99.487 |
99.49 |
0.99 |
| clpP | Streptococcus pyogenes JRS4 |
99.487 |
99.49 |
0.99 |
| clpP | Streptococcus pneumoniae Rx1 |
91.282 |
99.49 |
0.908 |
| clpP | Streptococcus pneumoniae D39 |
91.282 |
99.49 |
0.908 |
| clpP | Streptococcus pneumoniae R6 |
91.282 |
99.49 |
0.908 |
| clpP | Streptococcus mutans UA159 |
91.282 |
99.49 |
0.908 |
| clpP | Streptococcus pneumoniae TIGR4 |
91.282 |
99.49 |
0.908 |
| clpP | Streptococcus thermophilus LMG 18311 |
89.231 |
99.49 |
0.888 |
| clpP | Streptococcus thermophilus LMD-9 |
89.231 |
99.49 |
0.888 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
85.641 |
99.49 |
0.852 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
85.128 |
99.49 |
0.847 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
57.513 |
98.469 |
0.566 |
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
57.216 |
98.98 |
0.566 |