Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | FGK83_RS03715 | Genome accession | NZ_LR590465 |
| Coordinates | 740357..740806 (-) | Length | 149 a.a. |
| NCBI ID | WP_110432056.1 | Uniprot ID | - |
| Organism | Haemophilus influenzae strain NCTC8468 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 735357..745806
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FGK83_RS03695 (NCTC8468_00730) | rho | 735744..737006 (+) | 1263 | WP_005648966.1 | transcription termination factor Rho | - |
| FGK83_RS03700 (NCTC8468_00731) | pilD | 737060..737752 (-) | 693 | WP_105877453.1 | prepilin peptidase | Machinery gene |
| FGK83_RS03705 (NCTC8468_00732) | pilC | 737749..738969 (-) | 1221 | WP_138171685.1 | type II secretion system F family protein | Machinery gene |
| FGK83_RS03710 (NCTC8468_00733) | pilB | 738966..740360 (-) | 1395 | WP_138171687.1 | GspE/PulE family protein | Machinery gene |
| FGK83_RS03715 (NCTC8468_00734) | pilA | 740357..740806 (-) | 450 | WP_110432056.1 | prepilin peptidase-dependent pilin | Machinery gene |
| FGK83_RS03720 (NCTC8468_00735) | ampD | 740920..741474 (+) | 555 | WP_110432055.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| FGK83_RS03725 (NCTC8468_00736) | corC | 742106..743005 (+) | 900 | WP_138171689.1 | CNNM family magnesium/cobalt transport protein CorC | - |
| FGK83_RS03730 (NCTC8468_00737) | lnt | 743028..744557 (+) | 1530 | WP_138171691.1 | apolipoprotein N-acyltransferase | - |
| FGK83_RS03735 (NCTC8468_00738) | rsmE | 744607..745344 (+) | 738 | WP_005691816.1 | 16S rRNA (uracil(1498)-N(3))-methyltransferase | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 15447.72 Da Isoelectric Point: 8.4623
>NTDB_id=1126752 FGK83_RS03715 WP_110432056.1 740357..740806(-) (pilA) [Haemophilus influenzae strain NCTC8468]
MKLTTQQTLKKGFTLIELMIVIAIIAILATIAIPSYQNYTKKAAVSELLQASAPYKADVELCVYSTGKPSTCSGGSNGIA
ADITTAKGYVKSVTTSNGAITVAGNGTLDRMSYTLTAEGDSAKGVTWTTTCKGTDASLFPANFCGSVTQ
MKLTTQQTLKKGFTLIELMIVIAIIAILATIAIPSYQNYTKKAAVSELLQASAPYKADVELCVYSTGKPSTCSGGSNGIA
ADITTAKGYVKSVTTSNGAITVAGNGTLDRMSYTLTAEGDSAKGVTWTTTCKGTDASLFPANFCGSVTQ
Nucleotide
Download Length: 450 bp
>NTDB_id=1126752 FGK83_RS03715 WP_110432056.1 740357..740806(-) (pilA) [Haemophilus influenzae strain NCTC8468]
ATGAAATTAACAACACAGCAAACCTTGAAAAAAGGGTTTACATTAATAGAGCTAATGATTGTGATTGCAATTATTGCTAT
TTTAGCCACCATCGCAATTCCTTCTTATCAAAATTATACCAAAAAAGCTGCGGTATCCGAATTACTGCAAGCTTCTGCGC
CTTATAAGGCTGATGTGGAATTATGCGTTTATAGCACAGGCAAACCTTCTACTTGCTCAGGAGGAAGCAATGGAATTGCA
GCTGATATTACAACAGCAAAAGGCTATGTAAAATCAGTGACAACAAGCAACGGTGCAATAACAGTAGCTGGTAATGGTAC
ATTAGATAGAATGAGTTACACGCTCACGGCTGAAGGCGATAGTGCAAAAGGTGTAACTTGGACAACAACCTGCAAAGGAA
CAGATGCCTCTTTATTTCCAGCAAATTTTTGCGGAAGTGTCACACAATGA
ATGAAATTAACAACACAGCAAACCTTGAAAAAAGGGTTTACATTAATAGAGCTAATGATTGTGATTGCAATTATTGCTAT
TTTAGCCACCATCGCAATTCCTTCTTATCAAAATTATACCAAAAAAGCTGCGGTATCCGAATTACTGCAAGCTTCTGCGC
CTTATAAGGCTGATGTGGAATTATGCGTTTATAGCACAGGCAAACCTTCTACTTGCTCAGGAGGAAGCAATGGAATTGCA
GCTGATATTACAACAGCAAAAGGCTATGTAAAATCAGTGACAACAAGCAACGGTGCAATAACAGTAGCTGGTAATGGTAC
ATTAGATAGAATGAGTTACACGCTCACGGCTGAAGGCGATAGTGCAAAAGGTGTAACTTGGACAACAACCTGCAAAGGAA
CAGATGCCTCTTTATTTCCAGCAAATTTTTGCGGAAGTGTCACACAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Haemophilus influenzae 86-028NP |
87.919 |
100 |
0.879 |
| pilA | Haemophilus influenzae Rd KW20 |
83.221 |
100 |
0.832 |
| pilA | Glaesserella parasuis strain SC1401 |
58.389 |
100 |
0.584 |
| pilA2 | Legionella pneumophila str. Paris |
41.216 |
99.329 |
0.409 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
41.216 |
99.329 |
0.409 |