Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | YBT1520_RS15800 | Genome accession | NZ_CP004858 |
| Coordinates | 3035057..3035638 (+) | Length | 193 a.a. |
| NCBI ID | WP_000991610.1 | Uniprot ID | A0A9W5QF48 |
| Organism | Bacillus thuringiensis serovar kurstaki str. YBT-1520 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3030057..3040638
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| YBT1520_RS15775 (YBT1520_15745) | - | 3031176..3032543 (+) | 1368 | WP_001065165.1 | lytic polysaccharide monooxygenase | - |
| YBT1520_RS15780 (YBT1520_15750) | - | 3032670..3033104 (-) | 435 | WP_001190864.1 | GNAT family N-acetyltransferase | - |
| YBT1520_RS15785 (YBT1520_15755) | rpiA | 3033219..3033881 (-) | 663 | WP_001049986.1 | ribose 5-phosphate isomerase A | - |
| YBT1520_RS15790 (YBT1520_15760) | - | 3033886..3034206 (-) | 321 | WP_001125388.1 | 2Fe-2S iron-sulfur cluster-binding protein | - |
| YBT1520_RS15795 (YBT1520_15765) | - | 3034349..3035035 (+) | 687 | WP_000337520.1 | RNA polymerase subunit sigma-70 | - |
| YBT1520_RS15800 (YBT1520_15770) | clpP | 3035057..3035638 (+) | 582 | WP_000991610.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| YBT1520_RS15805 (YBT1520_15775) | - | 3035685..3036542 (-) | 858 | WP_001227621.1 | glycine betaine ABC transporter substrate-binding protein | - |
| YBT1520_RS15810 (YBT1520_15780) | - | 3036714..3037919 (+) | 1206 | WP_000370606.1 | glycine betaine/L-proline ABC transporter ATP-binding protein | - |
| YBT1520_RS15815 (YBT1520_15785) | - | 3037912..3038748 (+) | 837 | WP_001084760.1 | proline/glycine betaine ABC transporter permease | - |
| YBT1520_RS35695 (YBT1520_15790) | - | 3038802..3039038 (-) | 237 | WP_000283222.1 | hypothetical protein | - |
| YBT1520_RS15825 (YBT1520_15795) | - | 3039256..3039423 (+) | 168 | WP_000508470.1 | hypothetical protein | - |
| YBT1520_RS15830 (YBT1520_15800) | - | 3039515..3040015 (+) | 501 | WP_003284488.1 | HIT family protein | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21192.45 Da Isoelectric Point: 5.0776
>NTDB_id=112433 YBT1520_RS15800 WP_000991610.1 3035057..3035638(+) (clpP) [Bacillus thuringiensis serovar kurstaki str. YBT-1520]
MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQ
PIERVAHDTERDYFMTAEEAKAYGIVDDVVTKK
MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQ
PIERVAHDTERDYFMTAEEAKAYGIVDDVVTKK
Nucleotide
Download Length: 582 bp
>NTDB_id=112433 YBT1520_RS15800 WP_000991610.1 3035057..3035638(+) (clpP) [Bacillus thuringiensis serovar kurstaki str. YBT-1520]
ATGAATGCAATTCCATATGTAGTAGAACAAACAAAATTAGGAGAACGTTCCTATGATATATATTCAAGGTTATTAAAAGA
CCGCATTATTATTATCGGCTCAGAAATTAATGATCAAGTAGCGAGTAGTGTCGTAGCGCAATTATTATTTTTAGAAGCAG
AAGATGCAGAAAAAGATATATTCTTATACATCAATAGCCCTGGCGGTTCAACGACAGCAGGTTTTGCAATATTAGATACG
ATGAATTTAATTAAACCAGATGTGCAAACGCTATGCATGGGCTTTGCGGCATCATTCGGTGCATTGTTATTATTATCAGG
AGCAAAAGGAAAACGGTTTGCTCTCCCTAACAGTGAAATTATGATTCATCAGCCGCTTGGTGGTGCACAAGGGCAAGCAA
CAGAAATTGAAATAACTGCGAAAAGAATATTAAAGTTAAAGCATGATATTAATAAAATGATTGCAGAAAAAACGGGGCAA
CCGATTGAAAGAGTAGCACATGATACAGAAAGAGATTATTTTATGACTGCAGAAGAAGCGAAGGCATATGGGATTGTAGA
TGACGTTGTTACGAAAAAATAA
ATGAATGCAATTCCATATGTAGTAGAACAAACAAAATTAGGAGAACGTTCCTATGATATATATTCAAGGTTATTAAAAGA
CCGCATTATTATTATCGGCTCAGAAATTAATGATCAAGTAGCGAGTAGTGTCGTAGCGCAATTATTATTTTTAGAAGCAG
AAGATGCAGAAAAAGATATATTCTTATACATCAATAGCCCTGGCGGTTCAACGACAGCAGGTTTTGCAATATTAGATACG
ATGAATTTAATTAAACCAGATGTGCAAACGCTATGCATGGGCTTTGCGGCATCATTCGGTGCATTGTTATTATTATCAGG
AGCAAAAGGAAAACGGTTTGCTCTCCCTAACAGTGAAATTATGATTCATCAGCCGCTTGGTGGTGCACAAGGGCAAGCAA
CAGAAATTGAAATAACTGCGAAAAGAATATTAAAGTTAAAGCATGATATTAATAAAATGATTGCAGAAAAAACGGGGCAA
CCGATTGAAAGAGTAGCACATGATACAGAAAGAGATTATTTTATGACTGCAGAAGAAGCGAAGGCATATGGGATTGTAGA
TGACGTTGTTACGAAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
68.586 |
98.964 |
0.679 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
67.196 |
97.927 |
0.658 |
| clpP | Streptococcus pyogenes JRS4 |
56.085 |
97.927 |
0.549 |
| clpP | Streptococcus pyogenes MGAS315 |
56.085 |
97.927 |
0.549 |
| clpP | Streptococcus pneumoniae R6 |
55.208 |
99.482 |
0.549 |
| clpP | Streptococcus pneumoniae TIGR4 |
55.208 |
99.482 |
0.549 |
| clpP | Streptococcus pneumoniae Rx1 |
55.208 |
99.482 |
0.549 |
| clpP | Streptococcus thermophilus LMG 18311 |
55.208 |
99.482 |
0.549 |
| clpP | Streptococcus thermophilus LMD-9 |
55.208 |
99.482 |
0.549 |
| clpP | Streptococcus pneumoniae D39 |
55.208 |
99.482 |
0.549 |
| clpP | Streptococcus mutans UA159 |
53.968 |
97.927 |
0.528 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
52.381 |
97.927 |
0.513 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.265 |
97.927 |
0.492 |