Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   EL267_RS07870 Genome accession   NZ_LR134520
Coordinates   1550957..1551145 (-) Length   62 a.a.
NCBI ID   WP_000027835.1    Uniprot ID   A0AAV3JNT7
Organism   Streptococcus agalactiae strain NCTC13947     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1545957..1556145
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL267_RS07855 (NCTC13947_01566) gyrB 1546695..1548647 (-) 1953 WP_000134196.1 DNA topoisomerase (ATP-hydrolyzing) subunit B -
  EL267_RS07860 (NCTC13947_01567) - 1548648..1549208 (-) 561 WP_001106189.1 HAD-IA family hydrolase -
  EL267_RS07865 (NCTC13947_01568) - 1549327..1550532 (-) 1206 WP_121205421.1 FtsW/RodA/SpoVE family cell cycle protein -
  EL267_RS07870 prx 1550957..1551145 (-) 189 WP_000027835.1 hypothetical protein Regulator
  EL267_RS07875 (NCTC13947_01569) - 1551187..1551366 (-) 180 WP_000076709.1 CsbD family protein -
  EL267_RS07880 (NCTC13947_01570) - 1551544..1552191 (+) 648 Protein_1497 IS3 family transposase -
  EL267_RS07885 (NCTC13947_01571) - 1552243..1553544 (-) 1302 WP_000734168.1 sensor histidine kinase -
  EL267_RS07890 (NCTC13947_01572) - 1553541..1554194 (-) 654 WP_000699093.1 response regulator transcription factor -
  EL267_RS07895 (NCTC13947_01573) - 1554291..1555667 (-) 1377 WP_000594351.1 ABC transporter permease -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7180.25 Da        Isoelectric Point: 4.7815

>NTDB_id=1123821 EL267_RS07870 WP_000027835.1 1550957..1551145(-) (prx) [Streptococcus agalactiae strain NCTC13947]
MSIRTDIDEFKEAIDKGYISGNTVAIVRKNGKIFDYVLLHEEVREEEVVTVERVLDVLRKLS

Nucleotide


Download         Length: 189 bp        

>NTDB_id=1123821 EL267_RS07870 WP_000027835.1 1550957..1551145(-) (prx) [Streptococcus agalactiae strain NCTC13947]
TTGTCTATCAGAACAGATATAGATGAGTTTAAAGAAGCGATTGATAAAGGCTATATTTCAGGGAACACAGTAGCGATAGT
GCGTAAAAACGGAAAGATATTTGATTATGTGTTACTACACGAAGAAGTGAGAGAAGAAGAGGTTGTTACAGTTGAGAGAG
TGCTTGATGTACTGAGGAAGTTATCATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

72.222

87.097

0.629
  prx Streptococcus pyogenes MGAS8232

69.091

88.71

0.613
  prx Streptococcus pyogenes MGAS315

66.667

87.097

0.581
  prx Streptococcus pyogenes MGAS315

85

64.516

0.548
  prx Streptococcus pyogenes MGAS315

61.818

88.71

0.548
  prx Streptococcus pyogenes MGAS315

74.359

62.903

0.468
  prx Streptococcus pyogenes MGAS315

78.378

59.677

0.468

Multiple sequence alignment