Detailed information NTG1123807

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: EL267_RS05830
• Genome accession: NZ_LR134520
• Coordinates: 1111381..1112223 (+)
• Length: 280 a.a.
• NCBI ID: WP_001015243.1
• Uniprot ID: -
• Organism: Streptococcus agalactiae strain NCTC13947
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1106381..1117223

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL267_RS05805 (NCTC13947_01142)	-	1106674..1107223 (+)	550	Protein_1085	sugar O-acetyltransferase	-
EL267_RS05810 (NCTC13947_01144)	-	1107462..1108424 (+)	963	WP_000735584.1	ABC transporter permease	-
EL267_RS05815 (NCTC13947_01145)	-	1108421..1109395 (+)	975	WP_000588585.1	iron chelate uptake ABC transporter family permease subunit	-
EL267_RS05820 (NCTC13947_01146)	-	1109392..1110153 (+)	762	WP_000614756.1	ABC transporter ATP-binding protein	-
EL267_RS05825 (NCTC13947_01147)	-	1110215..1111243 (+)	1029	WP_000162764.1	siderophore ABC transporter substrate-binding protein	-
EL267_RS05830 (NCTC13947_01148)	dprA	1111381..1112223 (+)	843	WP_001015243.1	DNA-processing protein DprA	Machinery gene
EL267_RS05835 (NCTC13947_01149)	topA	1112318..1114438 (+)	2121	WP_050896390.1	type I DNA topoisomerase	-
EL267_RS05840 (NCTC13947_01150)	-	1114574..1115275 (+)	702	WP_000120349.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 280 a.a.
• Molecular weight: 31241.30 Da
• Isoelectric Point: 9.3800

>NTDB_id=1123807 EL267_RS05830 WP_001015243.1 1111381..1112223(+) (dprA) [Streptococcus agalactiae strain NCTC13947]
MNHFELFKLKKAGLTNLNINNIINYLKKNSITSLSVRNMAVVSKCKNPTFFIENYKQLDLKKLRQEFKKFPVLSILDSNY
PLELKEIYNPPVLLFYQGNIELLSKPKLAVVGARQASQIGCQSVKKIIKETNNQFVIVSGLARGIDTAAHVSALKNGGSS
IAVIGSGLDVYYPTENKKLQEYMSYNHLVLSEYFAGEQPLKFHFPERNRIIAGLCQGIVVAEAKMRSGSLITCERALEEG
REVFAIPGNIIDGKSDGCHHLIQEGAKCIISGKDILSEYQ

Nucleotide

• Length: 843 bp

>NTDB_id=1123807 EL267_RS05830 WP_001015243.1 1111381..1112223(+) (dprA) [Streptococcus agalactiae strain NCTC13947]
ATGAATCATTTTGAACTATTTAAGCTTAAAAAAGCTGGACTAACAAATCTTAATATCAACAATATTATCAACTATCTCAA
AAAGAATAGTATAACTTCTCTATCTGTTCGCAATATGGCCGTAGTGTCAAAATGTAAAAATCCTACTTTCTTTATAGAAA
ATTATAAACAGCTAGACCTTAAAAAACTTCGACAAGAATTCAAAAAATTTCCAGTTCTATCGATTTTGGATTCTAACTAT
CCTTTAGAGTTAAAAGAAATATATAATCCACCAGTTCTACTTTTTTATCAGGGTAATATTGAACTTCTATCTAAACCTAA
ATTAGCTGTAGTGGGGGCAAGACAGGCATCTCAGATAGGTTGTCAGTCTGTTAAAAAGATTATCAAGGAGACTAACAATC
AATTTGTTATCGTAAGTGGTTTAGCGCGTGGCATTGATACAGCAGCACATGTTAGTGCTTTAAAAAATGGCGGCAGTAGT
ATAGCTGTTATAGGGAGTGGTTTAGATGTTTATTATCCAACGGAGAATAAGAAACTTCAAGAATATATGTCATATAATCA
TCTCGTATTATCAGAATATTTCGCCGGAGAACAACCCTTGAAATTTCATTTCCCCGAACGTAACCGTATTATTGCAGGGC
TGTGCCAAGGTATTGTGGTTGCCGAAGCTAAGATGAGATCTGGAAGTTTAATTACCTGTGAAAGAGCATTAGAAGAGGGA
CGAGAAGTTTTTGCCATTCCCGGAAATATTATCGATGGCAAATCAGATGGATGCCACCATCTTATCCAAGAAGGAGCTAA
ATGCATTATTTCAGGAAAAGATATCCTTTCTGAATATCAGTAG

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (69-270)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-63)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	70.609	99.643	0.704
dprA/cilB/dalA	Streptococcus mitis SK321	62.5	100	0.625
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	61.786	100	0.618
dprA/cilB/dalA	Streptococcus pneumoniae D39	61.786	100	0.618
dprA/cilB/dalA	Streptococcus pneumoniae R6	61.786	100	0.618
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	61.786	100	0.618
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	61.429	100	0.614
dprA	Lactococcus lactis subsp. cremoris KW2	61.29	99.643	0.611
dprA	Latilactobacillus sakei subsp. sakei 23K	41.833	89.643	0.375
dprA	Haemophilus influenzae Rd KW20	37.132	97.143	0.361