Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | EL267_RS03220 | Genome accession | NZ_LR134520 |
| Coordinates | 595622..596212 (+) | Length | 196 a.a. |
| NCBI ID | WP_000613483.1 | Uniprot ID | A0AAV3JHA0 |
| Organism | Streptococcus agalactiae strain NCTC13947 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 590622..601212
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL267_RS03200 (NCTC13947_00626) | - | 591379..592731 (+) | 1353 | WP_121205142.1 | APC family permease | - |
| EL267_RS03205 (NCTC13947_00628) | - | 592904..593452 (+) | 549 | WP_001019794.1 | tRNA (cytidine(34)-2'-O)-methyltransferase | - |
| EL267_RS03210 (NCTC13947_00629) | - | 593588..594757 (+) | 1170 | WP_000634079.1 | MalY/PatB family protein | - |
| EL267_RS03215 (NCTC13947_00630) | upp | 594868..595497 (+) | 630 | WP_000514490.1 | uracil phosphoribosyltransferase | - |
| EL267_RS03220 (NCTC13947_00631) | clpP | 595622..596212 (+) | 591 | WP_000613483.1 | ATP-dependent Clp protease proteolytic subunit | Regulator |
| EL267_RS03225 (NCTC13947_00632) | - | 596312..596557 (+) | 246 | WP_001041186.1 | DUF2129 domain-containing protein | - |
| EL267_RS03230 (NCTC13947_00633) | - | 596711..597877 (+) | 1167 | WP_000415516.1 | ABC transporter substrate-binding protein | - |
| EL267_RS03235 (NCTC13947_00634) | - | 597983..598852 (+) | 870 | WP_000941396.1 | branched-chain amino acid ABC transporter permease | - |
| EL267_RS03240 (NCTC13947_00635) | - | 598855..599808 (+) | 954 | WP_000662326.1 | branched-chain amino acid ABC transporter permease | - |
| EL267_RS03245 (NCTC13947_00636) | - | 599809..600573 (+) | 765 | WP_001185985.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21550.52 Da Isoelectric Point: 4.5933
>NTDB_id=1123802 EL267_RS03220 WP_000613483.1 595622..596212(+) (clpP) [Streptococcus agalactiae strain NCTC13947]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGQVEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQSDMAIAAEHLLKTRHTLEKILADNSGQ
SIEKVHDDAERDRWMSAQETLDYGFIDAIMENNNLQ
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGQVEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQSDMAIAAEHLLKTRHTLEKILADNSGQ
SIEKVHDDAERDRWMSAQETLDYGFIDAIMENNNLQ
Nucleotide
Download Length: 591 bp
>NTDB_id=1123802 EL267_RS03220 WP_000613483.1 595622..596212(+) (clpP) [Streptococcus agalactiae strain NCTC13947]
ATGATTCCAGTAGTTATTGAACAAACAAGTCGTGGTGAACGCTCTTATGATATTTACTCACGTCTTTTAAAAGATCGTAT
TATTATGTTGACCGGCCAAGTTGAGGATAATATGGCCAATAGTATCATTGCACAGTTATTGTTTCTCGATGCACAAGATA
ATACAAAGGATATTTACCTTTATGTCAATACACCAGGTGGTTCAGTATCGGCTGGACTTGCTATTGTGGATACCATGAAC
TTTATTAAATCGGACGTACAGACGATTGTTATGGGGATGGCTGCTTCGATGGGAACCATTATTGCTTCGAGTGGTGCTAA
AGGAAAACGTTTTATGTTACCGAATGCAGAATATATGATCCACCAACCAATGGGTGGAACAGGCGGAGGCACACAGCAAT
CTGATATGGCTATCGCTGCTGAGCATCTTTTAAAAACGCGTCATACTTTAGAAAAAATCTTAGCTGATAATTCTGGTCAA
TCTATTGAAAAAGTCCATGATGATGCAGAGCGTGATCGTTGGATGAGTGCTCAAGAAACACTTGATTATGGCTTTATTGA
TGCTATTATGGAAAATAATAATCTACAATAA
ATGATTCCAGTAGTTATTGAACAAACAAGTCGTGGTGAACGCTCTTATGATATTTACTCACGTCTTTTAAAAGATCGTAT
TATTATGTTGACCGGCCAAGTTGAGGATAATATGGCCAATAGTATCATTGCACAGTTATTGTTTCTCGATGCACAAGATA
ATACAAAGGATATTTACCTTTATGTCAATACACCAGGTGGTTCAGTATCGGCTGGACTTGCTATTGTGGATACCATGAAC
TTTATTAAATCGGACGTACAGACGATTGTTATGGGGATGGCTGCTTCGATGGGAACCATTATTGCTTCGAGTGGTGCTAA
AGGAAAACGTTTTATGTTACCGAATGCAGAATATATGATCCACCAACCAATGGGTGGAACAGGCGGAGGCACACAGCAAT
CTGATATGGCTATCGCTGCTGAGCATCTTTTAAAAACGCGTCATACTTTAGAAAAAATCTTAGCTGATAATTCTGGTCAA
TCTATTGAAAAAGTCCATGATGATGCAGAGCGTGATCGTTGGATGAGTGCTCAAGAAACACTTGATTATGGCTTTATTGA
TGCTATTATGGAAAATAATAATCTACAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Streptococcus thermophilus LMG 18311 |
92.347 |
100 |
0.923 |
| clpP | Streptococcus thermophilus LMD-9 |
92.347 |
100 |
0.923 |
| clpP | Streptococcus pneumoniae Rx1 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pneumoniae D39 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pneumoniae R6 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pneumoniae TIGR4 |
92.308 |
99.49 |
0.918 |
| clpP | Streptococcus pyogenes JRS4 |
89.286 |
100 |
0.893 |
| clpP | Streptococcus pyogenes MGAS315 |
89.286 |
100 |
0.893 |
| clpP | Streptococcus mutans UA159 |
88.776 |
100 |
0.888 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
85.204 |
100 |
0.852 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
84.694 |
100 |
0.847 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
58.031 |
98.469 |
0.571 |
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
57.895 |
96.939 |
0.561 |