Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Machinery gene
Locus tag   EL276_RS07990 Genome accession   NZ_LR134516
Coordinates   1729843..1731081 (-) Length   412 a.a.
NCBI ID   WP_107879433.1    Uniprot ID   A0A448UDA3
Organism   Neisseria animaloris strain NCTC12227     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1724843..1736081
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL276_RS07960 (NCTC12227_01620) - 1725075..1726832 (+) 1758 WP_126304935.1 M61 family metallopeptidase -
  EL276_RS07965 (NCTC12227_01621) - 1726900..1727340 (+) 441 WP_126304936.1 TIGR01244 family sulfur transferase -
  EL276_RS07970 (NCTC12227_01622) yacG 1727395..1727583 (-) 189 WP_085391163.1 DNA gyrase inhibitor YacG -
  EL276_RS07975 (NCTC12227_01623) zapD 1727587..1728354 (-) 768 WP_085391164.1 cell division protein ZapD -
  EL276_RS07980 (NCTC12227_01624) coaE 1728351..1728971 (-) 621 WP_126304937.1 dephospho-CoA kinase -
  EL276_RS07985 (NCTC12227_01625) pilD 1728975..1729838 (-) 864 WP_126304938.1 prepilin peptidase Machinery gene
  EL276_RS07990 (NCTC12227_01626) pilG 1729843..1731081 (-) 1239 WP_107879433.1 type II secretion system F family protein Machinery gene
  EL276_RS07995 (NCTC12227_01627) pilF 1731120..1732799 (-) 1680 WP_085391168.1 type IV-A pilus assembly ATPase PilB Machinery gene
  EL276_RS08005 (NCTC12227_01629) - 1733497..1734117 (+) 621 WP_085391169.1 isochorismatase family protein -
  EL276_RS08010 (NCTC12227_01630) - 1734227..1735555 (-) 1329 WP_085391185.1 M23 family metallopeptidase -

Sequence

Protein


Download         Length: 412 a.a.        Molecular weight: 45246.38 Da        Isoelectric Point: 9.9820

>NTDB_id=1123733 EL276_RS07990 WP_107879433.1 1729843..1731081(-) (pilG) [Neisseria animaloris strain NCTC12227]
MNQVKQGGRSAKADKGIRFNFEGRNTETEQIVRGEVVAKNEEEAKKKLQRRGIKPLRVSKVKAVRKKRITQEDITVFTRQ
LATMMKAGLPLMQAFEIVARGHSNPSMTQMLMQIRADVEQGSALGKAFAKHPKYFDRFYCNLIAAGEAGGVLESLLDKLA
VYKEKTQAIKKKVKSALTYPIAIIVVAIVLVFIMMVFVLPAFGEVYSNMGAELPGLTQIVMDMSKFFVDYAWVMVVSIIG
IGFGLYKWYKKSPALQKRADAMLLKLPIFGEIVRKATIARWARTTSTLFAAGVPLVEVLDSVAGAAGNILYEEATHDIRA
KVTQGLSLTSSMQGTDMFPNMVLQMAAIGEESGSLDGMLNKAAEFYEDEVDNAVAQLSSLMEPIIMVVLGSIIGVILVAM
YLPLFNLGNVVG

Nucleotide


Download         Length: 1239 bp        

>NTDB_id=1123733 EL276_RS07990 WP_107879433.1 1729843..1731081(-) (pilG) [Neisseria animaloris strain NCTC12227]
ATGAATCAAGTAAAGCAAGGTGGGCGTTCTGCTAAAGCAGATAAGGGTATACGTTTTAATTTTGAGGGTAGAAACACCGA
AACCGAACAAATTGTACGCGGTGAAGTAGTGGCCAAAAATGAAGAGGAGGCTAAAAAAAAGCTGCAACGGCGCGGTATTA
AGCCGTTGCGTGTTAGTAAAGTTAAAGCTGTTCGTAAAAAGCGCATTACACAAGAAGATATTACAGTATTTACCCGCCAA
CTTGCTACGATGATGAAAGCCGGATTGCCATTGATGCAGGCATTTGAGATTGTGGCAAGAGGTCACTCTAATCCTTCCAT
GACTCAGATGCTTATGCAGATTCGAGCAGATGTAGAGCAGGGGAGTGCACTGGGTAAAGCTTTCGCAAAGCATCCGAAGT
ATTTTGACCGGTTTTATTGTAATCTGATCGCTGCTGGTGAAGCCGGCGGTGTGTTAGAAAGTTTGCTGGACAAACTTGCT
GTTTATAAGGAAAAAACCCAAGCGATTAAGAAGAAAGTGAAAAGTGCGCTTACTTATCCGATAGCTATTATCGTAGTGGC
GATAGTGCTGGTATTTATCATGATGGTGTTTGTTCTTCCTGCATTCGGTGAAGTATATAGTAACATGGGAGCAGAGCTGC
CTGGACTAACACAAATTGTTATGGATATGTCAAAGTTTTTTGTTGATTATGCTTGGGTAATGGTAGTTTCCATAATTGGT
ATAGGGTTTGGTTTATATAAATGGTATAAAAAATCTCCTGCTCTTCAAAAAAGAGCGGATGCCATGCTATTGAAACTGCC
AATTTTTGGAGAGATTGTGAGGAAAGCGACAATTGCACGTTGGGCGCGTACTACGTCTACTTTATTTGCAGCCGGAGTAC
CTTTAGTTGAGGTGTTGGATTCTGTGGCCGGTGCTGCCGGTAATATCTTGTATGAAGAGGCTACGCACGATATCCGTGCT
AAAGTAACACAAGGTTTGTCATTGACTTCCAGTATGCAGGGTACTGATATGTTCCCTAACATGGTACTTCAAATGGCGGC
AATTGGTGAGGAATCTGGTTCATTGGACGGCATGTTGAATAAGGCGGCTGAATTCTATGAAGATGAGGTAGACAATGCCG
TGGCTCAATTATCTTCCTTGATGGAGCCGATAATCATGGTGGTACTCGGTTCAATTATTGGTGTGATCCTTGTTGCTATG
TACTTGCCGTTGTTCAATTTGGGTAACGTGGTAGGTTAA

Domains

Predicted by InterproScan.

Type II secretion system (T2SS), protein F (T2SSF)

(77-200)

Type II secretion system (T2SS), protein F (T2SSF)

(281-403)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A448UDA3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Neisseria gonorrhoeae MS11

70.488

99.515

0.701
  pilG Neisseria meningitidis 44/76-A

70

99.515

0.697
  pilC Legionella pneumophila strain ERS1305867

46.867

96.845

0.454
  pilC Acinetobacter baumannii D1279779

46.734

96.602

0.451
  pilC Acinetobacter baylyi ADP1

45.865

96.845

0.444
  pilC Pseudomonas stutzeri DSM 10701

44.802

98.058

0.439
  pilC Vibrio cholerae strain A1552

38.693

96.602

0.374

Multiple sequence alignment