Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | EL230_RS03845 | Genome accession | NZ_LR134490 |
| Coordinates | 756711..757160 (+) | Length | 149 a.a. |
| NCBI ID | WP_015701561.1 | Uniprot ID | - |
| Organism | Haemophilus influenzae strain NCTC11873 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 751711..762160
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL230_RS03825 (NCTC11873_00760) | rsmE | 752173..752910 (-) | 738 | WP_005662982.1 | 16S rRNA (uracil(1498)-N(3))-methyltransferase | - |
| EL230_RS03830 (NCTC11873_00761) | lnt | 752960..754489 (-) | 1530 | WP_126513487.1 | apolipoprotein N-acyltransferase | - |
| EL230_RS03835 (NCTC11873_00762) | corC | 754512..755411 (-) | 900 | WP_005662987.1 | CNNM family magnesium/cobalt transport protein CorC | - |
| EL230_RS03840 (NCTC11873_00763) | ampD | 756043..756597 (-) | 555 | WP_041175038.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| EL230_RS03845 (NCTC11873_00764) | pilA | 756711..757160 (+) | 450 | WP_015701561.1 | prepilin peptidase-dependent pilin | Machinery gene |
| EL230_RS03850 (NCTC11873_00765) | pilB | 757157..758551 (+) | 1395 | WP_126513488.1 | GspE/PulE family protein | Machinery gene |
| EL230_RS03855 (NCTC11873_00766) | pilC | 758548..759768 (+) | 1221 | WP_126513489.1 | type II secretion system F family protein | Machinery gene |
| EL230_RS03860 (NCTC11873_00767) | pilD | 759765..760457 (+) | 693 | WP_126513490.1 | prepilin peptidase | Machinery gene |
| EL230_RS03865 (NCTC11873_00768) | rho | 760511..761773 (-) | 1263 | WP_005648966.1 | transcription termination factor Rho | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 15492.75 Da Isoelectric Point: 8.0914
>NTDB_id=1123198 EL230_RS03845 WP_015701561.1 756711..757160(+) (pilA) [Haemophilus influenzae strain NCTC11873]
MKLTTQQTLKKGFTLIELMIVIAIIAILATIAIPSYQNYTKKAAVSELLQASAPYKADVELCVYSTNETTSCTGGKNGIA
ADITTAKGYVKSVTTSNGAITVAGNGTLDGMSYTLTAEGDSAKGVTWKTTCKGTDASLFPANFCGSVTQ
MKLTTQQTLKKGFTLIELMIVIAIIAILATIAIPSYQNYTKKAAVSELLQASAPYKADVELCVYSTNETTSCTGGKNGIA
ADITTAKGYVKSVTTSNGAITVAGNGTLDGMSYTLTAEGDSAKGVTWKTTCKGTDASLFPANFCGSVTQ
Nucleotide
Download Length: 450 bp
>NTDB_id=1123198 EL230_RS03845 WP_015701561.1 756711..757160(+) (pilA) [Haemophilus influenzae strain NCTC11873]
ATGAAACTAACAACACAGCAAACCTTGAAAAAAGGTTTTACATTAATCGAGCTAATGATTGTGATTGCAATTATTGCTAT
TTTAGCCACTATCGCAATTCCTTCTTATCAAAATTATACCAAAAAAGCTGCGGTATCCGAATTACTGCAAGCGTCTGCGC
CTTATAAGGCTGATGTAGAATTATGTGTATATAGCACAAATGAAACAACAAGCTGTACAGGTGGAAAAAATGGTATTGCA
GCGGATATTACAACAGCAAAAGGCTATGTAAAATCAGTGACAACAAGCAACGGTGCAATAACAGTAGCGGGTAATGGTAC
ATTAGATGGAATGAGTTACACGCTCACGGCTGAAGGCGATAGTGCAAAAGGCGTTACATGGAAAACCACCTGCAAAGGAA
CGGATGCCTCTTTATTTCCAGCAAATTTTTGCGGAAGTGTCACACAATGA
ATGAAACTAACAACACAGCAAACCTTGAAAAAAGGTTTTACATTAATCGAGCTAATGATTGTGATTGCAATTATTGCTAT
TTTAGCCACTATCGCAATTCCTTCTTATCAAAATTATACCAAAAAAGCTGCGGTATCCGAATTACTGCAAGCGTCTGCGC
CTTATAAGGCTGATGTAGAATTATGTGTATATAGCACAAATGAAACAACAAGCTGTACAGGTGGAAAAAATGGTATTGCA
GCGGATATTACAACAGCAAAAGGCTATGTAAAATCAGTGACAACAAGCAACGGTGCAATAACAGTAGCGGGTAATGGTAC
ATTAGATGGAATGAGTTACACGCTCACGGCTGAAGGCGATAGTGCAAAAGGCGTTACATGGAAAACCACCTGCAAAGGAA
CGGATGCCTCTTTATTTCCAGCAAATTTTTGCGGAAGTGTCACACAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Haemophilus influenzae 86-028NP |
91.275 |
100 |
0.913 |
| pilA | Haemophilus influenzae Rd KW20 |
87.248 |
100 |
0.872 |
| pilA | Glaesserella parasuis strain SC1401 |
57.047 |
100 |
0.57 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
45.038 |
87.919 |
0.396 |
| pilA2 | Legionella pneumophila str. Paris |
44.615 |
87.248 |
0.389 |
| pilA | Vibrio campbellii strain DS40M4 |
38.298 |
94.631 |
0.362 |