Detailed information NTG1122395

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: EL239_RS04660
• Genome accession: NZ_LR134374
• Coordinates: 1081019..1082083 (-)
• Length: 354 a.a.
• NCBI ID: WP_126338543.1
• Uniprot ID: -
• Organism: Legionella spiritensis strain NCTC12082
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1076019..1087083

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL239_RS04635 (NCTC12082_00943)	aroK	1076532..1077059 (-)	528	WP_058482981.1	shikimate kinase AroK	-
EL239_RS04640 (NCTC12082_00944)	pilQ	1077147..1079288 (-)	2142	WP_058482982.1	type IV pilus secretin PilQ	Machinery gene
EL239_RS04645 (NCTC12082_00945)	pilP	1079298..1079804 (-)	507	WP_058483009.1	pilus assembly protein PilP	Machinery gene
EL239_RS04650 (NCTC12082_00946)	pilO	1079819..1080439 (-)	621	WP_126338541.1	type 4a pilus biogenesis protein PilO	Machinery gene
EL239_RS04655 (NCTC12082_00947)	pilN	1080436..1081014 (-)	579	WP_058482984.1	PilN domain-containing protein	Machinery gene
EL239_RS04660 (NCTC12082_00948)	pilM	1081019..1082083 (-)	1065	WP_126338543.1	pilus assembly protein PilM	Machinery gene
EL239_RS04665 (NCTC12082_00949)	-	1082428..1083546 (+)	1119	WP_126338545.1	hypothetical protein	-
EL239_RS04670 (NCTC12082_00950)	-	1083730..1086096 (+)	2367	WP_058482987.1	penicillin-binding protein 1A	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 38560.36 Da
• Isoelectric Point: 4.5687

>NTDB_id=1122395 EL239_RS04660 WP_126338543.1 1081019..1082083(-) (pilM) [Legionella spiritensis strain NCTC12082]
MLKLFKPKNRSVIGIDISSSSVKALEISTNDNTYCIEGYGYESLPANALDGNTIKDIDAVASCIKRVLVNAHLHGKSVVL
AVPDSSVISKVVQINEGLSDSEIEELIVIEADKYIPYPIDEINIDFEVLGHSPKNSAMLDVLIVASRAENVSSRVEAVSR
AGLEAKIVDVESFAVERAAQLLAKDLPAQGQDKIVAVIDIGSSFTDLFVLHGMKIIFTREEEFGGKQLIEAIARQYSVSF
DEAAAMKAEGRMPEDYEEAVLQPYIEMILLQIKRTLQFFFSTSHHGFVDHIILAGGVAMLPNLADLVQEKTGIPTSVANP
FDKMEIAPQLDRGRMLNEGPSLMIACGLALRTIG

Nucleotide

• Length: 1065 bp

>NTDB_id=1122395 EL239_RS04660 WP_126338543.1 1081019..1082083(-) (pilM) [Legionella spiritensis strain NCTC12082]
GTGCTCAAACTGTTTAAACCTAAAAATCGATCAGTTATCGGTATTGATATCAGTTCCTCTTCCGTCAAGGCTCTGGAAAT
TTCCACTAATGACAATACCTATTGTATTGAAGGCTATGGTTATGAAAGCCTTCCCGCCAATGCTCTGGACGGCAACACCA
TCAAGGATATTGACGCCGTCGCCTCCTGTATCAAACGGGTTCTGGTTAATGCTCATTTGCATGGCAAATCCGTGGTTCTC
GCGGTTCCTGATTCCTCAGTCATCAGCAAGGTCGTACAGATTAACGAAGGCTTGAGCGATTCGGAAATCGAGGAGCTTAT
CGTTATCGAAGCCGATAAATACATCCCTTATCCGATTGATGAAATCAATATAGACTTTGAGGTTCTGGGACATTCACCAA
AAAATTCCGCCATGCTCGATGTGCTGATTGTCGCATCGCGCGCTGAAAATGTAAGCAGTCGGGTTGAAGCTGTCAGCCGT
GCCGGTCTGGAAGCGAAAATAGTCGATGTCGAATCCTTTGCCGTAGAGCGGGCCGCTCAATTGCTTGCCAAAGACTTGCC
GGCCCAGGGGCAGGATAAAATTGTCGCGGTTATCGATATTGGCTCCTCGTTTACCGACTTGTTTGTCTTGCACGGGATGA
AAATCATCTTTACCCGGGAAGAGGAGTTTGGCGGCAAACAGTTGATAGAGGCTATTGCCAGACAATACTCGGTCAGTTTT
GATGAGGCGGCGGCAATGAAAGCGGAAGGCCGAATGCCGGAAGATTATGAAGAGGCGGTGTTGCAACCCTATATAGAAAT
GATTCTTCTGCAAATCAAACGTACTCTGCAATTTTTCTTTTCAACCAGTCATCACGGGTTTGTCGATCATATTATTCTGG
CCGGCGGGGTGGCCATGCTACCGAATTTAGCCGATCTGGTGCAGGAAAAAACAGGAATTCCGACCAGCGTGGCCAATCCC
TTCGATAAAATGGAAATAGCCCCTCAACTGGACAGGGGGCGTATGTTGAATGAAGGTCCCTCCCTGATGATCGCCTGCGG
ATTGGCTCTAAGGACGATTGGATGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-352)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Legionella pneumophila strain ERS1305867	64.589	99.718	0.644
pilM	Acinetobacter baumannii D1279779	43.059	99.718	0.429
comM	Acinetobacter nosocomialis M2	43.059	99.718	0.429
comM	Acinetobacter baylyi ADP1	41.926	99.718	0.418