Detailed information NTG1122255

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: EL167_RS06555
• Genome accession: NZ_LR134360
• Coordinates: 1409885..1410211 (+)
• Length: 108 a.a.
• NCBI ID: WP_047130996.1
• Uniprot ID: A0A143P863
• Organism: Staphylococcus condimenti strain NCTC13827
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1404885..1415211

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL167_RS06525	-	1405638..1405838 (+)	201	WP_047130990.1	YqgQ family protein	-
EL167_RS06530 (NCTC13827_01354)	-	1405838..1406824 (+)	987	WP_047130991.1	ROK family glucokinase	-
EL167_RS06535 (NCTC13827_01355)	-	1406824..1407153 (+)	330	WP_047130992.1	MTH1187 family thiamine-binding protein	-
EL167_RS06540 (NCTC13827_01356)	-	1407153..1407776 (+)	624	WP_047130993.1	MBL fold metallo-hydrolase	-
EL167_RS06545 (NCTC13827_01357)	comGA	1407848..1408822 (+)	975	WP_047130994.1	competence type IV pilus ATPase ComGA	Machinery gene
EL167_RS06550 (NCTC13827_01358)	comGB	1408794..1409867 (+)	1074	WP_047130995.1	competence type IV pilus assembly protein ComGB	-
EL167_RS06555 (NCTC13827_01359)	comGC	1409885..1410211 (+)	327	WP_047130996.1	competence type IV pilus major pilin ComGC	Machinery gene
EL167_RS06560 (NCTC13827_01360)	-	1410231..1410644 (+)	414	WP_232011920.1	prepilin-type cleavage/methylation domain-containing protein	-
EL167_RS12895 (NCTC13827_01361)	-	1410625..1410918 (+)	294	WP_047130998.1	hypothetical protein	-
EL167_RS06565 (NCTC13827_01362)	comGF	1410860..1411336 (+)	477	WP_047130999.1	competence type IV pilus minor pilin ComGF	-
EL167_RS06570 (NCTC13827_01363)	-	1411501..1412040 (+)	540	WP_152650907.1	shikimate kinase	-
EL167_RS06575 (NCTC13827_01364)	gcvT	1412232..1413326 (+)	1095	WP_047131000.1	glycine cleavage system aminomethyltransferase GcvT	-
EL167_RS06580 (NCTC13827_01365)	gcvPA	1413347..1414693 (+)	1347	WP_047131001.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-

Sequence

Protein

• Length: 108 a.a.
• Molecular weight: 12114.29 Da
• Isoelectric Point: 9.7598

>NTDB_id=1122255 EL167_RS06555 WP_047130996.1 1409885..1410211(+) (comGC) [Staphylococcus condimenti strain NCTC13827]
MKKYYLLFKNKNLKAFTLLEMLLVLLVISVLLILIIPNIAKQSEHVQSTGCEAQQKMVNSQIEAFTLKNNQKPNSIDELV
TQGYLKEGQKKCKSGESITIKNGEASIS

Nucleotide

• Length: 327 bp

>NTDB_id=1122255 EL167_RS06555 WP_047130996.1 1409885..1410211(+) (comGC) [Staphylococcus condimenti strain NCTC13827]
ATGAAAAAATATTACTTATTATTTAAAAATAAAAACTTAAAAGCTTTTACATTGTTAGAAATGTTGCTCGTATTGTTGGT
TATCAGTGTATTATTAATTTTGATTATACCTAACATTGCTAAGCAATCTGAACATGTTCAATCTACAGGTTGTGAGGCAC
AGCAAAAAATGGTGAATAGTCAAATAGAAGCCTTTACACTTAAAAATAACCAAAAGCCCAATTCTATCGATGAACTTGTA
ACACAAGGTTATCTAAAGGAAGGGCAAAAGAAATGTAAATCTGGAGAAAGTATAACAATTAAAAATGGTGAAGCTTCAAT
TAGCTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (11-35)

3D structure

• AlphaFold DB: A0A143P863

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus MW2	70.526	87.963	0.62
comGC	Staphylococcus aureus N315	70.526	87.963	0.62
comGC/cglC	Streptococcus mitis SK321	43.396	98.148	0.426
comGC/cglC	Streptococcus pneumoniae R6	42.453	98.148	0.417
comGC/cglC	Streptococcus pneumoniae D39	42.453	98.148	0.417
comGC/cglC	Streptococcus pneumoniae TIGR4	42.453	98.148	0.417
comGC/cglC	Streptococcus pneumoniae Rx1	42.453	98.148	0.417
comGC/cglC	Streptococcus mitis NCTC 12261	45.652	85.185	0.389
comGC	Bacillus subtilis subsp. subtilis str. 168	41.667	88.889	0.37