Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | EL167_RS06545 | Genome accession | NZ_LR134360 |
| Coordinates | 1407848..1408822 (+) | Length | 324 a.a. |
| NCBI ID | WP_047130994.1 | Uniprot ID | A0AB37HCC2 |
| Organism | Staphylococcus condimenti strain NCTC13827 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1402848..1413822
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL167_RS06515 (NCTC13827_01352) | - | 1403638..1404180 (+) | 543 | WP_047130988.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| EL167_RS06520 (NCTC13827_01353) | - | 1404197..1405657 (+) | 1461 | WP_047130989.1 | rhomboid family intramembrane serine protease | - |
| EL167_RS06525 | - | 1405638..1405838 (+) | 201 | WP_047130990.1 | YqgQ family protein | - |
| EL167_RS06530 (NCTC13827_01354) | - | 1405838..1406824 (+) | 987 | WP_047130991.1 | ROK family glucokinase | - |
| EL167_RS06535 (NCTC13827_01355) | - | 1406824..1407153 (+) | 330 | WP_047130992.1 | MTH1187 family thiamine-binding protein | - |
| EL167_RS06540 (NCTC13827_01356) | - | 1407153..1407776 (+) | 624 | WP_047130993.1 | MBL fold metallo-hydrolase | - |
| EL167_RS06545 (NCTC13827_01357) | comGA | 1407848..1408822 (+) | 975 | WP_047130994.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| EL167_RS06550 (NCTC13827_01358) | comGB | 1408794..1409867 (+) | 1074 | WP_047130995.1 | competence type IV pilus assembly protein ComGB | - |
| EL167_RS06555 (NCTC13827_01359) | comGC | 1409885..1410211 (+) | 327 | WP_047130996.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| EL167_RS06560 (NCTC13827_01360) | - | 1410231..1410644 (+) | 414 | WP_232011920.1 | prepilin-type cleavage/methylation domain-containing protein | - |
| EL167_RS12895 (NCTC13827_01361) | - | 1410625..1410918 (+) | 294 | WP_047130998.1 | hypothetical protein | - |
| EL167_RS06565 (NCTC13827_01362) | comGF | 1410860..1411336 (+) | 477 | WP_047130999.1 | competence type IV pilus minor pilin ComGF | - |
| EL167_RS06570 (NCTC13827_01363) | - | 1411501..1412040 (+) | 540 | WP_152650907.1 | shikimate kinase | - |
| EL167_RS06575 (NCTC13827_01364) | gcvT | 1412232..1413326 (+) | 1095 | WP_047131000.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36915.69 Da Isoelectric Point: 6.9948
>NTDB_id=1122254 EL167_RS06545 WP_047130994.1 1407848..1408822(+) (comGA) [Staphylococcus condimenti strain NCTC13827]
MKRLLDTILTDAISKNVSDIHFIPIEKEVLIKFRIHDELINYDNIEILTYSKLLTFMKFQAGLDVSNYHQAQSGQTTFKH
QKLFNLRISTLPLSLGIESCVIRLSPQYFYQDGNCDGPKHFYHLMNKKQGLILFTGPTGSGKSTMMYEMVSFALKNLHLN
IITVEDPVEKRISGITQISVNEKAGIDYENSFKAILRCDPDIILIGEIRDAHIAKCVIQAALSGHLVLSTLHSNDCEGAL
LRLLEMGISPQEAQQSIALISNQRLVTNQHGSRELAYETMYQSDIQYFFKHDHTMPKHFMKLSKVLTQMSEEGVICEEVL
KRYT
MKRLLDTILTDAISKNVSDIHFIPIEKEVLIKFRIHDELINYDNIEILTYSKLLTFMKFQAGLDVSNYHQAQSGQTTFKH
QKLFNLRISTLPLSLGIESCVIRLSPQYFYQDGNCDGPKHFYHLMNKKQGLILFTGPTGSGKSTMMYEMVSFALKNLHLN
IITVEDPVEKRISGITQISVNEKAGIDYENSFKAILRCDPDIILIGEIRDAHIAKCVIQAALSGHLVLSTLHSNDCEGAL
LRLLEMGISPQEAQQSIALISNQRLVTNQHGSRELAYETMYQSDIQYFFKHDHTMPKHFMKLSKVLTQMSEEGVICEEVL
KRYT
Nucleotide
Download Length: 975 bp
>NTDB_id=1122254 EL167_RS06545 WP_047130994.1 1407848..1408822(+) (comGA) [Staphylococcus condimenti strain NCTC13827]
ATGAAAAGACTTTTAGATACAATTCTGACAGATGCTATTTCTAAAAATGTTTCTGACATTCATTTTATTCCTATCGAAAA
AGAAGTTTTAATTAAGTTCAGAATTCATGATGAGCTGATAAATTATGACAACATAGAGATTCTGACATATTCAAAGTTAC
TTACATTTATGAAATTTCAAGCAGGTCTCGATGTGTCTAATTATCATCAAGCGCAAAGTGGACAGACTACTTTTAAGCAT
CAAAAATTGTTTAATTTACGTATTTCAACATTACCGCTATCTTTAGGAATTGAGAGTTGTGTCATACGACTTTCTCCACA
ATATTTCTATCAAGATGGTAATTGTGATGGACCAAAACATTTCTATCATCTAATGAATAAAAAACAAGGACTTATTTTAT
TTACAGGTCCAACTGGATCTGGAAAAAGCACTATGATGTATGAAATGGTTTCATTTGCTTTGAAAAATTTACACCTAAAT
ATTATTACTGTTGAGGATCCGGTTGAAAAAAGGATTTCAGGTATTACTCAAATTTCAGTAAACGAAAAAGCAGGTATTGA
TTATGAAAATTCATTCAAAGCTATATTGCGTTGTGATCCCGATATAATTCTCATCGGAGAAATAAGGGATGCTCATATTG
CAAAATGTGTAATTCAAGCAGCATTAAGCGGACATTTGGTACTATCCACTTTGCATTCAAATGATTGTGAAGGTGCTTTA
TTGAGGTTATTAGAAATGGGTATATCTCCTCAAGAAGCACAACAATCCATTGCTCTAATTTCAAATCAACGTCTCGTAAC
TAATCAGCATGGAAGCAGAGAATTGGCTTATGAAACGATGTATCAGTCTGATATTCAATATTTCTTCAAACATGACCACA
CAATGCCTAAGCATTTTATGAAGTTAAGCAAAGTGTTAACTCAAATGAGTGAAGAAGGTGTTATCTGTGAAGAAGTACTT
AAAAGATATACTTAA
ATGAAAAGACTTTTAGATACAATTCTGACAGATGCTATTTCTAAAAATGTTTCTGACATTCATTTTATTCCTATCGAAAA
AGAAGTTTTAATTAAGTTCAGAATTCATGATGAGCTGATAAATTATGACAACATAGAGATTCTGACATATTCAAAGTTAC
TTACATTTATGAAATTTCAAGCAGGTCTCGATGTGTCTAATTATCATCAAGCGCAAAGTGGACAGACTACTTTTAAGCAT
CAAAAATTGTTTAATTTACGTATTTCAACATTACCGCTATCTTTAGGAATTGAGAGTTGTGTCATACGACTTTCTCCACA
ATATTTCTATCAAGATGGTAATTGTGATGGACCAAAACATTTCTATCATCTAATGAATAAAAAACAAGGACTTATTTTAT
TTACAGGTCCAACTGGATCTGGAAAAAGCACTATGATGTATGAAATGGTTTCATTTGCTTTGAAAAATTTACACCTAAAT
ATTATTACTGTTGAGGATCCGGTTGAAAAAAGGATTTCAGGTATTACTCAAATTTCAGTAAACGAAAAAGCAGGTATTGA
TTATGAAAATTCATTCAAAGCTATATTGCGTTGTGATCCCGATATAATTCTCATCGGAGAAATAAGGGATGCTCATATTG
CAAAATGTGTAATTCAAGCAGCATTAAGCGGACATTTGGTACTATCCACTTTGCATTCAAATGATTGTGAAGGTGCTTTA
TTGAGGTTATTAGAAATGGGTATATCTCCTCAAGAAGCACAACAATCCATTGCTCTAATTTCAAATCAACGTCTCGTAAC
TAATCAGCATGGAAGCAGAGAATTGGCTTATGAAACGATGTATCAGTCTGATATTCAATATTTCTTCAAACATGACCACA
CAATGCCTAAGCATTTTATGAAGTTAAGCAAAGTGTTAACTCAAATGAGTGAAGAAGGTGTTATCTGTGAAGAAGTACTT
AAAAGATATACTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
59.752 |
99.691 |
0.596 |
| comGA | Staphylococcus aureus N315 |
59.752 |
99.691 |
0.596 |