Detailed information    

insolico Bioinformatically predicted

Overview

Name   htrA   Type   Regulator
Locus tag   EL147_RS06040 Genome accession   NZ_LR134341
Coordinates   1231742..1232944 (-) Length   400 a.a.
NCBI ID   WP_007891607.1    Uniprot ID   -
Organism   Streptococcus pseudoporcinus strain NCTC13786     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1226742..1237944
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL147_RS06015 (NCTC13786_01203) - 1227226..1227633 (-) 408 WP_007891597.1 helix-turn-helix domain-containing protein -
  EL147_RS06020 (NCTC13786_01204) - 1227744..1227944 (-) 201 WP_007891625.1 DUF951 domain-containing protein -
  EL147_RS06025 (NCTC13786_01205) dnaN 1228014..1229147 (-) 1134 WP_007891593.1 DNA polymerase III subunit beta -
  EL147_RS06030 (NCTC13786_01206) dnaA 1229302..1230657 (-) 1356 WP_007891643.1 chromosomal replication initiator protein DnaA -
  EL147_RS06035 (NCTC13786_01207) spo0J 1230892..1231665 (-) 774 WP_007891568.1 ParB/RepB/Spo0J family partition protein Regulator
  EL147_RS06040 (NCTC13786_01208) htrA 1231742..1232944 (-) 1203 WP_007891607.1 S1C family serine protease Regulator
  EL147_RS06045 (NCTC13786_01209) rlmH 1233141..1233620 (+) 480 WP_037598993.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  EL147_RS06065 (NCTC13786_01213) - 1234147..1236732 (-) 2586 WP_007896235.1 YfhO family protein -

Sequence

Protein


Download         Length: 400 a.a.        Molecular weight: 42595.37 Da        Isoelectric Point: 6.7493

>NTDB_id=1122012 EL147_RS06040 WP_007891607.1 1231742..1232944(-) (htrA) [Streptococcus pseudoporcinus strain NCTC13786]
MTIIKNISKLFGILVVGILGGVIAFFALSAFHPDFTNNQEGVAKPTTVSKVTYKNTTNTTKAVKVVQNAVVSVINYRKSD
SANQTYDIFGEARPSSKDDNGYSIYSEGSGVIYKKEGKEAYIVTNNHVIDKTDRIEILLADGSKVVGKLVGADTYSDLAV
VKVSSEKIKTIAKFANSANLNVGEVAIAIGSPLGTEYANSVTEGIVSSLSRTVTLKNDEGQTISTNAIQTDAAINPGNSG
GALINIEGQVIGINSSKISQSNASGNAVEGMGFAIPSNDVIKIINQLEAKGEVIRPAIGIRMVNLGDLSTNALNQLQVPE
DVKGGIVVASVIDNMPAVGKLKQYDIITEIDGEVVNTKSDLQSILYGHEINDDIKVTYYRGKEKKTTTIKLTKTTKDLKE

Nucleotide


Download         Length: 1203 bp        

>NTDB_id=1122012 EL147_RS06040 WP_007891607.1 1231742..1232944(-) (htrA) [Streptococcus pseudoporcinus strain NCTC13786]
GTGACAATAATAAAAAATATTTCGAAACTATTTGGTATCTTGGTGGTTGGTATTCTTGGTGGTGTTATTGCTTTTTTCGC
ACTAAGTGCCTTTCACCCTGATTTTACTAATAATCAAGAGGGAGTTGCAAAACCCACAACAGTTAGTAAAGTGACTTATA
AAAATACGACTAATACTACAAAAGCTGTTAAAGTTGTTCAAAATGCTGTCGTTTCAGTCATTAATTATCGAAAATCTGAT
TCAGCTAATCAAACTTATGATATTTTTGGTGAAGCTAGACCTTCTTCAAAAGACGACAATGGTTACTCTATTTATAGTGA
AGGATCAGGGGTGATTTACAAAAAAGAAGGCAAAGAAGCCTATATTGTAACGAACAACCATGTTATTGACAAAACAGATA
GAATTGAAATTTTACTAGCCGATGGTTCAAAGGTAGTTGGTAAATTAGTAGGAGCTGACACATATTCTGATCTAGCAGTT
GTTAAAGTTTCTTCAGAAAAAATTAAGACAATTGCTAAATTTGCCAATTCTGCCAATTTAAACGTTGGTGAAGTGGCTAT
TGCTATTGGTAGTCCTTTAGGAACCGAGTATGCTAACTCTGTTACAGAAGGAATAGTATCAAGTTTAAGCAGAACAGTAA
CTCTTAAAAATGATGAAGGGCAGACCATTTCAACAAATGCTATTCAAACAGATGCAGCTATTAACCCAGGAAATTCTGGA
GGTGCTTTAATTAATATTGAAGGTCAGGTTATTGGAATTAATTCAAGTAAAATCTCACAATCTAACGCTTCTGGCAATGC
AGTTGAAGGAATGGGATTTGCAATTCCATCTAATGATGTTATTAAAATTATTAACCAGTTGGAAGCCAAGGGTGAGGTTA
TTCGACCAGCCATTGGAATTAGAATGGTAAACCTTGGTGATTTATCAACGAATGCTTTGAACCAACTTCAAGTACCAGAA
GATGTTAAAGGTGGTATTGTGGTTGCTTCAGTGATAGATAATATGCCTGCAGTTGGTAAACTAAAGCAATATGATATTAT
CACCGAAATTGATGGTGAAGTGGTGAATACAAAGTCTGATTTACAAAGTATCCTTTACGGTCATGAGATAAATGATGACA
TTAAAGTTACTTACTATCGTGGTAAAGAAAAGAAAACAACCACTATCAAATTGACAAAAACAACAAAAGATTTAAAGGAA
TAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(296-391)

Trypsin-like peptidase domain (Trypsin_2)

(108-253)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

60.969

98

0.597
  htrA Streptococcus gordonii str. Challis substr. CH1

53.885

99.75

0.538
  htrA Streptococcus pneumoniae Rx1

53.015

99.5

0.527
  htrA Streptococcus pneumoniae TIGR4

53.015

99.5

0.527
  htrA Streptococcus pneumoniae D39

53.015

99.5

0.527
  htrA Streptococcus pneumoniae R6

53.015

99.5

0.527
  htrA Streptococcus mitis NCTC 12261

53.453

97.75

0.523

Multiple sequence alignment