Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   EL147_RS06035 Genome accession   NZ_LR134341
Coordinates   1230892..1231665 (-) Length   257 a.a.
NCBI ID   WP_007891568.1    Uniprot ID   G5K7C3
Organism   Streptococcus pseudoporcinus strain NCTC13786     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1225892..1236665
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL147_RS06010 (NCTC13786_01202) ychF 1226030..1227145 (-) 1116 WP_007891636.1 redox-regulated ATPase YchF -
  EL147_RS06015 (NCTC13786_01203) - 1227226..1227633 (-) 408 WP_007891597.1 helix-turn-helix domain-containing protein -
  EL147_RS06020 (NCTC13786_01204) - 1227744..1227944 (-) 201 WP_007891625.1 DUF951 domain-containing protein -
  EL147_RS06025 (NCTC13786_01205) dnaN 1228014..1229147 (-) 1134 WP_007891593.1 DNA polymerase III subunit beta -
  EL147_RS06030 (NCTC13786_01206) dnaA 1229302..1230657 (-) 1356 WP_007891643.1 chromosomal replication initiator protein DnaA -
  EL147_RS06035 (NCTC13786_01207) spo0J 1230892..1231665 (-) 774 WP_007891568.1 ParB/RepB/Spo0J family partition protein Regulator
  EL147_RS06040 (NCTC13786_01208) htrA 1231742..1232944 (-) 1203 WP_007891607.1 S1C family serine protease Regulator
  EL147_RS06045 (NCTC13786_01209) rlmH 1233141..1233620 (+) 480 WP_037598993.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 29314.82 Da        Isoelectric Point: 7.5541

>NTDB_id=1122011 EL147_RS06035 WP_007891568.1 1230892..1231665(-) (spo0J) [Streptococcus pseudoporcinus strain NCTC13786]
MTEELKEIRVEDIVANPHQPRLHFDYEELKELANSIKINGLIQPIIVRPSEIYGYELIAGERRLKASQLAGLEKVPAVIK
NISTTESMHQAIVENLQRSDLNPIEEAKAFQNILTKKHLTHEQLATFMGKSRPYITNSIRLLQLPDIILTALEEGKISSG
HARSLVTLDNSQAQEDYFHRIIDQDLSVRQTEQLVKLKKQAKKPQINTNIFIKALEEELAKSLGLPIHIKLKKDGSGQLS
CFFQNEEELNRIINKLK

Nucleotide


Download         Length: 774 bp        

>NTDB_id=1122011 EL147_RS06035 WP_007891568.1 1230892..1231665(-) (spo0J) [Streptococcus pseudoporcinus strain NCTC13786]
ATGACAGAAGAATTAAAAGAAATAAGAGTAGAAGATATTGTTGCTAACCCACATCAACCTAGACTTCACTTTGATTATGA
AGAATTAAAAGAATTAGCAAACTCTATTAAAATAAATGGACTCATACAACCTATTATCGTCAGACCATCCGAAATTTACG
GCTATGAATTAATTGCGGGTGAGAGACGTTTAAAGGCATCTCAGTTAGCTGGTTTAGAAAAAGTTCCTGCAGTTATTAAA
AATATTTCAACAACTGAAAGTATGCATCAAGCAATCGTGGAAAATCTTCAACGATCAGACTTAAATCCAATTGAAGAAGC
AAAAGCTTTTCAAAATATTCTTACTAAAAAGCATTTAACACATGAACAATTAGCTACCTTTATGGGCAAATCACGTCCCT
ACATCACTAATAGTATCCGCCTTTTACAATTACCTGATATCATTTTGACTGCACTAGAAGAGGGAAAAATTAGTTCTGGC
CATGCACGTAGTTTAGTTACTTTGGATAATAGTCAAGCTCAAGAGGATTATTTTCATCGCATTATTGACCAAGACCTCAG
CGTACGTCAGACTGAGCAGCTAGTAAAATTAAAAAAACAAGCTAAAAAGCCGCAGATAAACACAAATATTTTTATTAAAG
CCCTCGAAGAAGAACTTGCTAAATCATTAGGCCTGCCCATTCATATTAAACTAAAAAAAGATGGTAGTGGACAATTATCT
TGCTTTTTTCAGAATGAAGAAGAACTTAACAGAATTATCAACAAACTAAAATGA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(7-95)

HTH domain found in ParB protein (HTH_ParB)

(148-196)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G5K7C3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

56.809

100

0.568

Multiple sequence alignment