Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | EL097_RS00605 | Genome accession | NZ_LR134293 |
| Coordinates | 125157..125747 (-) | Length | 196 a.a. |
| NCBI ID | WP_093998442.1 | Uniprot ID | - |
| Organism | Streptococcus canis strain NCTC12191 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 120157..130747
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL097_RS00570 (NCTC12191_00110) | yabA | 120753..121076 (-) | 324 | WP_003046904.1 | DNA replication initiation control protein YabA | - |
| EL097_RS00575 (NCTC12191_00111) | ricT | 121069..121869 (-) | 801 | WP_003046901.1 | regulatory iron-sulfur-containing complex subunit RicT | - |
| EL097_RS00580 (NCTC12191_00112) | - | 121866..122738 (-) | 873 | WP_003046898.1 | DNA polymerase III subunit delta' | - |
| EL097_RS00585 (NCTC12191_00113) | tmk | 122754..123389 (-) | 636 | WP_003046895.1 | dTMP kinase | - |
| EL097_RS00595 (NCTC12191_00114) | - | 124135..124422 (-) | 288 | WP_003046884.1 | YlbG family protein | - |
| EL097_RS00600 (NCTC12191_00115) | - | 124422..124868 (-) | 447 | WP_039994942.1 | YlbF family regulator | - |
| EL097_RS00605 (NCTC12191_00116) | clpP | 125157..125747 (-) | 591 | WP_093998442.1 | ATP-dependent Clp protease proteolytic subunit | Regulator |
| EL097_RS00610 (NCTC12191_00117) | upp | 125968..126597 (-) | 630 | WP_003046872.1 | uracil phosphoribosyltransferase | - |
| EL097_RS00615 (NCTC12191_00118) | - | 126797..128431 (-) | 1635 | WP_003046868.1 | polysaccharide biosynthesis protein | - |
| EL097_RS00620 (NCTC12191_00119) | - | 128519..129964 (+) | 1446 | WP_003046866.1 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21634.85 Da Isoelectric Point: 5.2834
>NTDB_id=1120475 EL097_RS00605 WP_093998442.1 125157..125747(-) (clpP) [Streptococcus canis strain NCTC12191]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK
TIKQVHKDAERDYWMSAEETLAYGFIDEIMENNELK
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK
TIKQVHKDAERDYWMSAEETLAYGFIDEIMENNELK
Nucleotide
Download Length: 591 bp
>NTDB_id=1120475 EL097_RS00605 WP_093998442.1 125157..125747(-) (clpP) [Streptococcus canis strain NCTC12191]
ATGATTCCTGTTGTTATTGAACAAACCAGTCGTGGCGAACGTTCTTACGACATTTATTCACGCTTGTTAAAAGACCGTAT
CATCATGTTGACAGGTCCTGTTGAAGATAATATGGCAAATTCTGTCATTGCGCAGCTTTTATTCCTTGATGCTCAAGACA
ATACGAAAGATATTTATTTATATGTCAATACACCTGGTGGCTCTGTCTCAGCGGGTTTGGCTATTGTAGACACTATGAAC
TTTATCAAGGCTGATGTTCAGACTATTGTGATGGGGATGGCGGCTTCTATGGGGACTGTCATTGCTTCATCAGGAACTAA
AGGCAAGCGCTTTATGTTACCAAATGCAGAATACATGATTCACCAACCAATGGGTGGTACAGGTGGTGGCACACAACAAA
CGGATATGGCTATTGCGGCAGAGCACCTCTTGAAAACACGTCACCGTTTAGAAAAAATCTTGGCACAAAATGCTGGAAAA
ACCATTAAACAAGTTCACAAAGATGCTGAACGTGACTATTGGATGAGTGCCGAAGAAACCTTAGCTTATGGTTTTATTGA
CGAGATTATGGAAAACAACGAATTAAAATAA
ATGATTCCTGTTGTTATTGAACAAACCAGTCGTGGCGAACGTTCTTACGACATTTATTCACGCTTGTTAAAAGACCGTAT
CATCATGTTGACAGGTCCTGTTGAAGATAATATGGCAAATTCTGTCATTGCGCAGCTTTTATTCCTTGATGCTCAAGACA
ATACGAAAGATATTTATTTATATGTCAATACACCTGGTGGCTCTGTCTCAGCGGGTTTGGCTATTGTAGACACTATGAAC
TTTATCAAGGCTGATGTTCAGACTATTGTGATGGGGATGGCGGCTTCTATGGGGACTGTCATTGCTTCATCAGGAACTAA
AGGCAAGCGCTTTATGTTACCAAATGCAGAATACATGATTCACCAACCAATGGGTGGTACAGGTGGTGGCACACAACAAA
CGGATATGGCTATTGCGGCAGAGCACCTCTTGAAAACACGTCACCGTTTAGAAAAAATCTTGGCACAAAATGCTGGAAAA
ACCATTAAACAAGTTCACAAAGATGCTGAACGTGACTATTGGATGAGTGCCGAAGAAACCTTAGCTTATGGTTTTATTGA
CGAGATTATGGAAAACAACGAATTAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Streptococcus pyogenes JRS4 |
99.49 |
100 |
0.995 |
| clpP | Streptococcus pyogenes MGAS315 |
99.49 |
100 |
0.995 |
| clpP | Streptococcus pneumoniae Rx1 |
91.282 |
99.49 |
0.908 |
| clpP | Streptococcus pneumoniae D39 |
91.282 |
99.49 |
0.908 |
| clpP | Streptococcus pneumoniae R6 |
91.282 |
99.49 |
0.908 |
| clpP | Streptococcus pneumoniae TIGR4 |
91.282 |
99.49 |
0.908 |
| clpP | Streptococcus thermophilus LMG 18311 |
90.306 |
100 |
0.903 |
| clpP | Streptococcus thermophilus LMD-9 |
90.306 |
100 |
0.903 |
| clpP | Streptococcus mutans UA159 |
90.306 |
100 |
0.903 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
85.714 |
100 |
0.857 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
85.204 |
100 |
0.852 |
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
56.633 |
100 |
0.566 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
56.477 |
98.469 |
0.556 |