Detailed information NTG1120160

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: EL100_RS02675
• Genome accession: NZ_LR134285
• Coordinates: 522814..523266 (-)
• Length: 150 a.a.
• NCBI ID: WP_048717662.1
• Uniprot ID: -
• Organism: Streptococcus australis strain NCTC3168
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 517814..528266

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL100_RS02650 (NCTC3168_00547)	folP	518230..519186 (-)	957	WP_164555425.1	dihydropteroate synthase	-
EL100_RS02655 (NCTC3168_00548)	-	519345..520019 (-)	675	WP_224781595.1	CPBP family intramembrane glutamic endopeptidase	-
EL100_RS02660 (NCTC3168_00549)	-	520172..521368 (-)	1197	WP_126403669.1	acetate kinase	-
EL100_RS02665 (NCTC3168_00550)	comYH	521417..522370 (-)	954	WP_126403668.1	class I SAM-dependent methyltransferase	Machinery gene
EL100_RS02670 (NCTC3168_00551)	comGG	522402..522848 (-)	447	WP_126403667.1	competence type IV pilus minor pilin ComGG	-
EL100_RS02675 (NCTC3168_00552)	comGF/cglF	522814..523266 (-)	453	WP_048717662.1	competence type IV pilus minor pilin ComGF	Machinery gene
EL100_RS02680 (NCTC3168_00553)	comGE	523250..523543 (-)	294	WP_006595134.1	competence type IV pilus minor pilin ComGE	-
EL100_RS02685	comGD/cglD	523509..523934 (-)	426	WP_042507426.1	competence type IV pilus minor pilin ComGD	Machinery gene
EL100_RS02690 (NCTC3168_00555)	comYC	523903..524220 (-)	318	WP_023022076.1	competence type IV pilus major pilin ComGC	Machinery gene
EL100_RS02695 (NCTC3168_00556)	comYB	524217..525239 (-)	1023	WP_126403665.1	competence type IV pilus assembly protein ComGB	Machinery gene
EL100_RS02700 (NCTC3168_00557)	comYA	525181..526122 (-)	942	WP_126403664.1	competence type IV pilus ATPase ComGA	Machinery gene
EL100_RS02705 (NCTC3168_00558)	-	526229..526606 (-)	378	WP_048717460.1	DUF1033 family protein	-
EL100_RS02710 (NCTC3168_00559)	-	526814..527917 (-)	1104	WP_126403663.1	glycosyl hydrolase family 8	-

Sequence

Protein

• Length: 150 a.a.
• Molecular weight: 17203.82 Da
• Isoelectric Point: 4.8970

>NTDB_id=1120160 EL100_RS02675 WP_048717662.1 522814..523266(-) (comGF/cglF) [Streptococcus australis strain NCTC3168]
MLKRTKLPAFTLLEALVALLVISGGLLVFQGLTSLLRQELQYQSHIKQEEWLLFQDQLDIELSRSQFEEVRDNKLYLVQD
QKPIAIGLAKGGDIRKTDATGRGYQPMIDGVESAWIEKRGDLVSIQLRFEEGLEREVVYRVVEKDKKEAD

Nucleotide

• Length: 453 bp

>NTDB_id=1120160 EL100_RS02675 WP_048717662.1 522814..523266(-) (comGF/cglF) [Streptococcus australis strain NCTC3168]
CTGTTGAAAAGAACTAAACTGCCAGCCTTTACTTTACTGGAGGCCTTGGTTGCCCTGCTCGTCATTAGCGGTGGTTTATT
GGTGTTTCAAGGATTGACAAGCCTCTTGCGTCAAGAACTCCAGTACCAAAGTCACATCAAGCAAGAGGAATGGCTTCTCT
TTCAGGACCAGCTGGACATTGAATTGTCTCGTAGCCAATTTGAAGAGGTCAGAGACAACAAACTCTATCTTGTTCAGGAT
CAAAAACCCATAGCCATTGGACTGGCTAAGGGAGGAGATATCCGAAAGACAGATGCGACTGGCCGTGGCTATCAACCGAT
GATAGATGGAGTTGAATCAGCCTGGATTGAAAAAAGAGGGGATCTGGTATCTATTCAACTGCGCTTTGAAGAAGGGTTAG
AAAGGGAGGTGGTCTACCGTGTGGTGGAAAAGGATAAAAAAGAAGCAGATTGA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (38-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae Rx1	56.944	96	0.547
comGF/cglF	Streptococcus pneumoniae D39	56.944	96	0.547
comGF/cglF	Streptococcus pneumoniae R6	56.944	96	0.547
comGF/cglF	Streptococcus pneumoniae TIGR4	56.944	96	0.547
comGF/cglF	Streptococcus mitis NCTC 12261	55.396	92.667	0.513
comGF/cglF	Streptococcus mitis SK321	55.396	92.667	0.513
comYF	Streptococcus mutans UA159	42.069	96.667	0.407
comYF	Streptococcus mutans UA140	42.069	96.667	0.407
comGF	Lactococcus lactis subsp. cremoris KW2	39.286	93.333	0.367