Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | EL100_RS02665 | Genome accession | NZ_LR134285 |
| Coordinates | 521417..522370 (-) | Length | 317 a.a. |
| NCBI ID | WP_126403668.1 | Uniprot ID | - |
| Organism | Streptococcus australis strain NCTC3168 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 516417..527370
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL100_RS02645 (NCTC3168_00546) | - | 516909..518213 (-) | 1305 | WP_126403671.1 | bifunctional folylpolyglutamate synthase/dihydrofolate synthase | - |
| EL100_RS02650 (NCTC3168_00547) | folP | 518230..519186 (-) | 957 | WP_164555425.1 | dihydropteroate synthase | - |
| EL100_RS02655 (NCTC3168_00548) | - | 519345..520019 (-) | 675 | WP_224781595.1 | CPBP family intramembrane glutamic endopeptidase | - |
| EL100_RS02660 (NCTC3168_00549) | - | 520172..521368 (-) | 1197 | WP_126403669.1 | acetate kinase | - |
| EL100_RS02665 (NCTC3168_00550) | comYH | 521417..522370 (-) | 954 | WP_126403668.1 | class I SAM-dependent methyltransferase | Machinery gene |
| EL100_RS02670 (NCTC3168_00551) | comGG | 522402..522848 (-) | 447 | WP_126403667.1 | competence type IV pilus minor pilin ComGG | - |
| EL100_RS02675 (NCTC3168_00552) | comGF/cglF | 522814..523266 (-) | 453 | WP_048717662.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| EL100_RS02680 (NCTC3168_00553) | comGE | 523250..523543 (-) | 294 | WP_006595134.1 | competence type IV pilus minor pilin ComGE | - |
| EL100_RS02685 | comGD/cglD | 523509..523934 (-) | 426 | WP_042507426.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| EL100_RS02690 (NCTC3168_00555) | comYC | 523903..524220 (-) | 318 | WP_023022076.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| EL100_RS02695 (NCTC3168_00556) | comYB | 524217..525239 (-) | 1023 | WP_126403665.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| EL100_RS02700 (NCTC3168_00557) | comYA | 525181..526122 (-) | 942 | WP_126403664.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| EL100_RS02705 (NCTC3168_00558) | - | 526229..526606 (-) | 378 | WP_048717460.1 | DUF1033 family protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 36075.90 Da Isoelectric Point: 4.3083
>NTDB_id=1120159 EL100_RS02665 WP_126403668.1 521417..522370(-) (comYH) [Streptococcus australis strain NCTC3168]
MNFEKIEKAYGYLLENTQTIQNDLQTNFYDALVEQNAIYLDGQTELTLVKENNQRLKDLNLNKEEWRRSFQYLLMKAAQT
EPLQANHQFTPDGIGFLLVFLVDQLASSDQVDVLEMGSGTGNLAQTLMNNCQRSLDYLGLEIDDLLIDLAASMAEVMKAD
VNFAQGDAIRPQVLKESDVIISDLPVGYYPDDAIASRYQVASPQGHTYAHHLLIEQSLKYLKPGGVAIFLAPNDLLTSEQ
SPLLKKWMQDHAQVLAMVTLPENLFRSANLAKTIFVFRKQEEAVVQPFVYPLTDLQDQEDLMKFRESFQNWNKESEI
MNFEKIEKAYGYLLENTQTIQNDLQTNFYDALVEQNAIYLDGQTELTLVKENNQRLKDLNLNKEEWRRSFQYLLMKAAQT
EPLQANHQFTPDGIGFLLVFLVDQLASSDQVDVLEMGSGTGNLAQTLMNNCQRSLDYLGLEIDDLLIDLAASMAEVMKAD
VNFAQGDAIRPQVLKESDVIISDLPVGYYPDDAIASRYQVASPQGHTYAHHLLIEQSLKYLKPGGVAIFLAPNDLLTSEQ
SPLLKKWMQDHAQVLAMVTLPENLFRSANLAKTIFVFRKQEEAVVQPFVYPLTDLQDQEDLMKFRESFQNWNKESEI
Nucleotide
Download Length: 954 bp
>NTDB_id=1120159 EL100_RS02665 WP_126403668.1 521417..522370(-) (comYH) [Streptococcus australis strain NCTC3168]
ATGAATTTCGAAAAAATTGAGAAAGCCTACGGCTACCTATTAGAGAATACCCAAACTATCCAAAATGATTTACAGACCAA
CTTTTATGATGCTCTAGTGGAGCAGAATGCCATCTATCTGGATGGGCAAACAGAGTTGACTCTAGTGAAGGAAAACAACC
AGCGCCTGAAGGACTTGAACTTAAACAAGGAAGAGTGGCGTCGTTCCTTCCAGTATCTTTTGATGAAGGCTGCCCAAACA
GAGCCCCTACAGGCCAATCACCAATTTACGCCAGATGGGATTGGATTTCTTCTGGTCTTCCTAGTGGATCAGTTGGCTAG
TTCCGATCAAGTGGATGTGCTAGAAATGGGGAGTGGAACAGGGAACTTGGCCCAAACCTTGATGAACAACTGTCAGCGTT
CCTTAGATTATTTGGGCTTGGAAATTGATGATCTCTTGATTGACCTTGCGGCTAGTATGGCAGAAGTGATGAAGGCGGAT
GTGAATTTTGCCCAAGGTGATGCCATTCGTCCACAAGTTTTGAAAGAGAGCGATGTGATTATCAGCGATTTACCTGTCGG
TTATTATCCAGATGATGCCATTGCGAGTCGTTACCAGGTCGCTTCCCCTCAGGGCCACACCTATGCCCATCATTTATTGA
TTGAACAATCGCTAAAATACTTAAAACCAGGTGGCGTCGCTATTTTTCTAGCTCCGAATGATCTCTTGACGAGTGAGCAG
AGTCCTCTGCTGAAAAAATGGATGCAGGATCATGCTCAGGTCTTGGCCATGGTGACCTTGCCAGAGAACCTCTTTCGATC
AGCCAATCTAGCAAAAACCATCTTTGTTTTCCGCAAGCAAGAAGAAGCGGTGGTCCAACCATTTGTCTATCCTTTGACTG
ATTTGCAAGACCAGGAAGACCTCATGAAATTCCGTGAAAGTTTTCAAAACTGGAATAAAGAAAGTGAAATTTAA
ATGAATTTCGAAAAAATTGAGAAAGCCTACGGCTACCTATTAGAGAATACCCAAACTATCCAAAATGATTTACAGACCAA
CTTTTATGATGCTCTAGTGGAGCAGAATGCCATCTATCTGGATGGGCAAACAGAGTTGACTCTAGTGAAGGAAAACAACC
AGCGCCTGAAGGACTTGAACTTAAACAAGGAAGAGTGGCGTCGTTCCTTCCAGTATCTTTTGATGAAGGCTGCCCAAACA
GAGCCCCTACAGGCCAATCACCAATTTACGCCAGATGGGATTGGATTTCTTCTGGTCTTCCTAGTGGATCAGTTGGCTAG
TTCCGATCAAGTGGATGTGCTAGAAATGGGGAGTGGAACAGGGAACTTGGCCCAAACCTTGATGAACAACTGTCAGCGTT
CCTTAGATTATTTGGGCTTGGAAATTGATGATCTCTTGATTGACCTTGCGGCTAGTATGGCAGAAGTGATGAAGGCGGAT
GTGAATTTTGCCCAAGGTGATGCCATTCGTCCACAAGTTTTGAAAGAGAGCGATGTGATTATCAGCGATTTACCTGTCGG
TTATTATCCAGATGATGCCATTGCGAGTCGTTACCAGGTCGCTTCCCCTCAGGGCCACACCTATGCCCATCATTTATTGA
TTGAACAATCGCTAAAATACTTAAAACCAGGTGGCGTCGCTATTTTTCTAGCTCCGAATGATCTCTTGACGAGTGAGCAG
AGTCCTCTGCTGAAAAAATGGATGCAGGATCATGCTCAGGTCTTGGCCATGGTGACCTTGCCAGAGAACCTCTTTCGATC
AGCCAATCTAGCAAAAACCATCTTTGTTTTCCGCAAGCAAGAAGAAGCGGTGGTCCAACCATTTGTCTATCCTTTGACTG
ATTTGCAAGACCAGGAAGACCTCATGAAATTCCGTGAAAGTTTTCAAAACTGGAATAAAGAAAGTGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
59.048 |
99.369 |
0.587 |
| comYH | Streptococcus mutans UA159 |
58.73 |
99.369 |
0.584 |