Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   EL070_RS08760 Genome accession   NZ_LR134284
Coordinates   1641840..1642391 (-) Length   183 a.a.
NCBI ID   WP_010921894.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC8232     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1636840..1647391
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL070_RS08725 (NCTC8232_01755) - 1636843..1637586 (-) 744 WP_011889139.1 class I SAM-dependent DNA methyltransferase -
  EL070_RS08730 (NCTC8232_01756) rsfS 1637634..1637987 (-) 354 WP_011017339.1 ribosome silencing factor -
  EL070_RS08735 (NCTC8232_01757) yqeK 1638011..1638604 (-) 594 WP_002985989.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  EL070_RS08740 (NCTC8232_01758) - 1638601..1639233 (-) 633 WP_011017338.1 nicotinate-nucleotide adenylyltransferase -
  EL070_RS08745 (NCTC8232_01759) yhbY 1639302..1639610 (-) 309 WP_002991094.1 ribosome assembly RNA-binding protein YhbY -
  EL070_RS08750 (NCTC8232_01760) yqeH 1639636..1640754 (-) 1119 WP_002985994.1 ribosome biogenesis GTPase YqeH -
  EL070_RS08755 (NCTC8232_01761) - 1640754..1641281 (-) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  EL070_RS08760 (NCTC8232_01762) comX/sigX/comX2/sigX2 1641840..1642391 (-) 552 WP_010921894.1 sigma-70 family RNA polymerase sigma factor Regulator

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22281.08 Da        Isoelectric Point: 10.0375

>NTDB_id=1120124 EL070_RS08760 WP_010921894.1 1641840..1642391(-) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain NCTC8232]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=1120124 EL070_RS08760 WP_010921894.1 1641840..1642391(-) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain NCTC8232]
ATGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.