Detailed information NTG1120027

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: EL079_RS05075
• Genome accession: NZ_LR134283
• Coordinates: 1042482..1043096 (-)
• Length: 204 a.a.
• NCBI ID: WP_223349572.1
• Uniprot ID: -
• Organism: Streptococcus anginosus strain NCTC10713
• Function: degradation of ComX; require for competence development (at the early growth phase); repress competence development (at the mid-logarithmic growth phase) (predicted from homology) Competence regulation

Genomic Context

Location: 1037482..1048096

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL079_RS05050 (NCTC10713_01056)	-	1037901..1038665 (-)	765	WP_003032371.1	ABC transporter ATP-binding protein	-
EL079_RS05055 (NCTC10713_01057)	-	1038665..1039615 (-)	951	WP_003032380.1	branched-chain amino acid ABC transporter permease	-
EL079_RS05060 (NCTC10713_01058)	-	1039619..1040488 (-)	870	WP_018543650.1	branched-chain amino acid ABC transporter permease	-
EL079_RS05065 (NCTC10713_01059)	-	1040876..1042039 (-)	1164	WP_003032423.1	ABC transporter substrate-binding protein	-
EL079_RS05070 (NCTC10713_01060)	-	1042122..1042391 (-)	270	WP_003032401.1	YlbG family protein	-
EL079_RS05075 (NCTC10713_01061)	clpP	1042482..1043096 (-)	615	WP_223349572.1	ATP-dependent Clp protease proteolytic subunit	Regulator
EL079_RS05080 (NCTC10713_01062)	upp	1043185..1043814 (-)	630	WP_003025639.1	uracil phosphoribosyltransferase	-
EL079_RS05090 (NCTC10713_01063)	mgtA	1043912..1046566 (-)	2655	WP_003032364.1	magnesium-translocating P-type ATPase	-

Sequence

Protein

• Length: 204 a.a.
• Molecular weight: 22503.62 Da
• Isoelectric Point: 4.6199

>NTDB_id=1120027 EL079_RS05075 WP_223349572.1 1042482..1043096(-) (clpP) [Streptococcus anginosus strain NCTC10713]
MSDEKENTMIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDNTKDIYLYINTPGGSVSAG
LAIVDTMNFIKSDVQTIVMGMAASMGTIIASSGAKGKRFMLPNAEYLIHQPMGGTGSGTQQTDMAIAAEHLLKTRNNLEK
ILADNSGKTIKQVHKDAERDYWMSAQETLDYGFIDEIMANNNLN

Nucleotide

• Length: 615 bp

>NTDB_id=1120027 EL079_RS05075 WP_223349572.1 1042482..1043096(-) (clpP) [Streptococcus anginosus strain NCTC10713]
ATATCAGATGAAAAGGAGAATACAATGATTCCTGTAGTTATTGAACAAACAAGCCGTGGAGAACGTTCCTACGATATTTA
CTCACGCTTATTAAAAGATCGCATTATTATGCTGACGGGTCCTGTTGAGGACAATATGGCTAATTCCATTATTGCGCAAT
TACTTTTTCTTGATGCGCAGGATAATACCAAAGATATTTATCTTTACATCAATACGCCAGGCGGTTCCGTATCAGCTGGT
CTAGCGATTGTTGATACCATGAACTTCATCAAATCAGATGTCCAAACAATTGTCATGGGGATGGCTGCTTCCATGGGAAC
CATTATTGCTTCAAGTGGTGCTAAAGGCAAGCGCTTCATGTTGCCGAATGCAGAATACCTGATTCACCAACCAATGGGCG
GAACTGGTAGCGGTACGCAACAAACCGATATGGCGATTGCGGCTGAGCATTTGCTGAAAACCCGGAATAACTTGGAGAAA
ATCCTTGCGGATAATTCAGGGAAAACCATTAAGCAAGTTCATAAAGATGCTGAACGTGACTACTGGATGAGTGCTCAAGA
AACGCTAGATTATGGTTTCATTGATGAAATCATGGCAAATAACAACTTGAACTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (19-200)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus mutans UA159	89.655	99.51	0.892
clpP	Streptococcus thermophilus LMD-9	92.308	95.588	0.882
clpP	Streptococcus thermophilus LMG 18311	92.308	95.588	0.882
clpP	Streptococcus pyogenes JRS4	91.795	95.588	0.877
clpP	Streptococcus pyogenes MGAS315	91.795	95.588	0.877
clpP	Streptococcus pneumoniae D39	90.816	96.078	0.873
clpP	Streptococcus pneumoniae Rx1	90.816	96.078	0.873
clpP	Streptococcus pneumoniae R6	90.816	96.078	0.873
clpP	Streptococcus pneumoniae TIGR4	90.816	96.078	0.873
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	86.667	95.588	0.828
clpP	Lactococcus lactis subsp. cremoris KW2	86.154	95.588	0.824
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	56.995	94.608	0.539
clpP	Bacillus subtilis subsp. subtilis str. 168	56.25	94.118	0.529