Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | EL086_RS01960 | Genome accession | NZ_LR134274 |
| Coordinates | 381783..382373 (+) | Length | 196 a.a. |
| NCBI ID | WP_002883818.1 | Uniprot ID | A0AB33ZFD4 |
| Organism | Streptococcus salivarius strain NCTC8618 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 376783..387373
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL086_RS01950 (NCTC8618_02803) | - | 377974..380889 (+) | 2916 | WP_038675329.1 | glycoside hydrolase family 68 protein | - |
| EL086_RS01955 (NCTC8618_02804) | upp | 380979..381608 (+) | 630 | WP_002883819.1 | uracil phosphoribosyltransferase | - |
| EL086_RS01960 (NCTC8618_02805) | clpP | 381783..382373 (+) | 591 | WP_002883818.1 | ATP-dependent Clp protease proteolytic subunit | Regulator |
| EL086_RS01965 (NCTC8618_02806) | - | 382459..382908 (+) | 450 | WP_014633922.1 | YlbF family regulator | - |
| EL086_RS01970 (NCTC8618_02807) | - | 382901..383182 (+) | 282 | WP_014633923.1 | DUF2129 domain-containing protein | - |
| EL086_RS01975 (NCTC8618_02808) | - | 383338..384513 (+) | 1176 | WP_038675331.1 | ABC transporter substrate-binding protein | - |
| EL086_RS01980 (NCTC8618_02809) | - | 384557..385441 (+) | 885 | WP_002883743.1 | branched-chain amino acid ABC transporter permease | - |
| EL086_RS01985 (NCTC8618_02810) | - | 385445..386395 (+) | 951 | WP_002883720.1 | branched-chain amino acid ABC transporter permease | - |
| EL086_RS01990 (NCTC8618_02811) | - | 386398..387162 (+) | 765 | WP_002883723.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21533.57 Da Isoelectric Point: 4.4829
>NTDB_id=1119805 EL086_RS01960 WP_002883818.1 381783..382373(+) (clpP) [Streptococcus salivarius strain NCTC8618]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNNLEQILADNSGQ
PIEKVHVDAERDNWMSAQETLEYGFIDEIMANNQLK
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNNLEQILADNSGQ
PIEKVHVDAERDNWMSAQETLEYGFIDEIMANNQLK
Nucleotide
Download Length: 591 bp
>NTDB_id=1119805 EL086_RS01960 WP_002883818.1 381783..382373(+) (clpP) [Streptococcus salivarius strain NCTC8618]
ATGATTCCTGTAGTAATTGAACAAACATCACGCGGTGAGCGTTCTTATGATATTTACTCACGTTTGCTCAAGGATCGTAT
CATCATGTTAACAGGTCCTGTTGAAGATAATATGGCAAACTCAATTATCGCCCAACTCTTGTTCTTGGATGCTCAAGACA
ACACAAAAGATATCTATCTTTATGTTAATACACCAGGTGGATCAGTTTCGGCAGGTCTTGCCATTGTTGATACAATGAAC
TTCATCAAGTCTGATGTTCAGACTATCGTTATGGGGATGGCAGCATCTATGGGAACAATTATTGCTTCAAGCGGTACCAA
AGGTAAACGTTTCATGTTGCCAAATGCAGAGTACATGATTCACCAACCAATGGGTGGTACTGGTGGTGGTACGCAACAAA
CAGACATGGCTATCGCAGCTGAACATTTGCTCAAAACGCGTAATAACTTGGAGCAAATCTTGGCGGATAATTCTGGACAG
CCAATTGAAAAAGTTCATGTAGACGCTGAACGTGACAATTGGATGAGTGCCCAAGAAACGCTTGAATATGGCTTTATCGA
TGAAATCATGGCTAATAACCAATTAAAATAG
ATGATTCCTGTAGTAATTGAACAAACATCACGCGGTGAGCGTTCTTATGATATTTACTCACGTTTGCTCAAGGATCGTAT
CATCATGTTAACAGGTCCTGTTGAAGATAATATGGCAAACTCAATTATCGCCCAACTCTTGTTCTTGGATGCTCAAGACA
ACACAAAAGATATCTATCTTTATGTTAATACACCAGGTGGATCAGTTTCGGCAGGTCTTGCCATTGTTGATACAATGAAC
TTCATCAAGTCTGATGTTCAGACTATCGTTATGGGGATGGCAGCATCTATGGGAACAATTATTGCTTCAAGCGGTACCAA
AGGTAAACGTTTCATGTTGCCAAATGCAGAGTACATGATTCACCAACCAATGGGTGGTACTGGTGGTGGTACGCAACAAA
CAGACATGGCTATCGCAGCTGAACATTTGCTCAAAACGCGTAATAACTTGGAGCAAATCTTGGCGGATAATTCTGGACAG
CCAATTGAAAAAGTTCATGTAGACGCTGAACGTGACAATTGGATGAGTGCCCAAGAAACGCTTGAATATGGCTTTATCGA
TGAAATCATGGCTAATAACCAATTAAAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Streptococcus thermophilus LMG 18311 |
98.98 |
100 |
0.99 |
| clpP | Streptococcus thermophilus LMD-9 |
98.98 |
100 |
0.99 |
| clpP | Streptococcus pneumoniae Rx1 |
93.846 |
99.49 |
0.934 |
| clpP | Streptococcus pneumoniae D39 |
93.846 |
99.49 |
0.934 |
| clpP | Streptococcus pneumoniae R6 |
93.846 |
99.49 |
0.934 |
| clpP | Streptococcus pneumoniae TIGR4 |
93.846 |
99.49 |
0.934 |
| clpP | Streptococcus pyogenes JRS4 |
90.306 |
100 |
0.903 |
| clpP | Streptococcus pyogenes MGAS315 |
90.306 |
100 |
0.903 |
| clpP | Streptococcus mutans UA159 |
88.265 |
100 |
0.883 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
87.755 |
100 |
0.878 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
87.245 |
100 |
0.872 |
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
58.163 |
100 |
0.582 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
58.031 |
98.469 |
0.571 |