Detailed information NTG1119772

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: EL077_RS08040
• Genome accession: NZ_LR134273
• Coordinates: 1713461..1714051 (-)
• Length: 196 a.a.
• NCBI ID: WP_012677455.1
• Uniprot ID: A0A922T644
• Organism: Streptococcus equi subsp. equi strain NCTC12091
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1708461..1719051

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL077_RS08005 (NCTC12091_01623)	rsmI	1708804..1709670 (-)	867	WP_012516194.1	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	-
EL077_RS08010 (NCTC12091_01624)	yabA	1709675..1709998 (-)	324	WP_012516195.1	DNA replication initiation control protein YabA	-
EL077_RS08015 (NCTC12091_01625)	ricT	1709991..1710791 (-)	801	WP_021321086.1	regulatory iron-sulfur-containing complex subunit RicT	-
EL077_RS08020 (NCTC12091_01626)	-	1710788..1711663 (-)	876	WP_021321087.1	DNA polymerase III subunit delta'	-
EL077_RS08025 (NCTC12091_01627)	tmk	1711677..1712312 (-)	636	WP_021321088.1	dTMP kinase	-
EL077_RS08030 (NCTC12091_01628)	-	1712625..1712909 (-)	285	WP_012677457.1	YlbG family protein	-
EL077_RS08035 (NCTC12091_01629)	-	1712910..1713356 (-)	447	WP_012516200.1	YlbF family regulator	-
EL077_RS08040 (NCTC12091_01630)	clpP	1713461..1714051 (-)	591	WP_012677455.1	ATP-dependent Clp protease proteolytic subunit	Regulator
EL077_RS08045 (NCTC12091_01631)	upp	1714282..1714911 (-)	630	WP_012516202.1	uracil phosphoribosyltransferase	-
EL077_RS08050 (NCTC12091_01632)	-	1715061..1716692 (-)	1632	WP_126437019.1	putative polysaccharide biosynthesis protein	-
EL077_RS08055 (NCTC12091_01633)	-	1716778..1718223 (+)	1446	WP_111692726.1	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21561.76 Da
• Isoelectric Point: 5.0281

>NTDB_id=1119772 EL077_RS08040 WP_012677455.1 1713461..1714051(-) (clpP) [Streptococcus equi subsp. equi strain NCTC12091]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK
TIKQIHKDAERDYWMSAEETLAYGFIDEIMENNELA

Nucleotide

• Length: 591 bp

>NTDB_id=1119772 EL077_RS08040 WP_012677455.1 1713461..1714051(-) (clpP) [Streptococcus equi subsp. equi strain NCTC12091]
ATGATTCCTGTAGTTATTGAACAAACCAGTCGTGGAGAGCGTTCTTATGACATTTATTCACGTCTGTTAAAGGACCGTAT
TATCATGCTGACTGGTCCAGTAGAGGATAATATGGCAAACTCTGTTATTGCGCAGCTCTTGTTTTTAGATGCCCAAGACA
ACACAAAAGACATTTACCTCTATGTGAATACCCCAGGAGGCTCTGTATCAGCTGGTCTAGCTATTGTGGATACGATGAAC
TTTATTAAGGCAGATGTGCAAACCATTGTTATGGGTATGGCTGCCTCTATGGGAACCGTTATTGCTTCATCAGGTGCAAA
GGGCAAGCGCTTTATGCTTCCAAATGCAGAGTACATGATTCACCAGCCTATGGGAGGCACAGGTGGTGGTACACAGCAGA
CAGATATGGCCATTGCGGCTGAGCATTTATTAAAGACACGTCACCGCTTGGAAAAGATTTTGGCACAAAATGCCGGTAAA
ACGATCAAACAAATCCATAAGGACGCTGAGCGTGATTACTGGATGAGCGCAGAAGAAACCCTAGCCTATGGCTTTATTGA
TGAAATCATGGAAAATAATGAGCTAGCTTAG

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes MGAS315	99.487	99.49	0.99
clpP	Streptococcus pyogenes JRS4	99.487	99.49	0.99
clpP	Streptococcus pneumoniae Rx1	91.282	99.49	0.908
clpP	Streptococcus pneumoniae D39	91.282	99.49	0.908
clpP	Streptococcus pneumoniae R6	91.282	99.49	0.908
clpP	Streptococcus mutans UA159	91.282	99.49	0.908
clpP	Streptococcus pneumoniae TIGR4	91.282	99.49	0.908
clpP	Streptococcus thermophilus LMG 18311	89.231	99.49	0.888
clpP	Streptococcus thermophilus LMD-9	89.231	99.49	0.888
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	85.641	99.49	0.852
clpP	Lactococcus lactis subsp. cremoris KW2	85.128	99.49	0.847
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.513	98.469	0.566
clpP	Bacillus subtilis subsp. subtilis str. 168	57.216	98.98	0.566