Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   EL020_RS03885 Genome accession   NZ_LR134203
Coordinates   733070..733255 (+) Length   61 a.a.
NCBI ID   WP_043894982.1    Uniprot ID   -
Organism   Streptococcus lutetiensis strain NCTC11436     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 728070..738255
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL020_RS03850 (NCTC11436_00801) - 728104..729339 (+) 1236 WP_020916368.1 cell division protein FtsQ/DivIB -
  EL020_RS03855 (NCTC11436_00802) - 729361..730314 (-) 954 WP_020916154.1 IS30 family transposase -
  EL020_RS09810 - 730387..730599 (+) 213 WP_020916369.1 hypothetical protein -
  EL020_RS09815 (NCTC11436_00803) - 730601..730858 (+) 258 WP_058813711.1 hypothetical protein -
  EL020_RS09820 (NCTC11436_00804) - 730868..731218 (+) 351 WP_058833193.1 hypothetical protein -
  EL020_RS03875 (NCTC11436_00805) - 731511..731714 (+) 204 WP_020916371.1 cold-shock protein -
  EL020_RS03880 (NCTC11436_00806) - 732465..732746 (+) 282 WP_231997013.1 DUF1492 domain-containing protein -
  EL020_RS03885 (NCTC11436_00807) prx 733070..733255 (+) 186 WP_043894982.1 Paratox Regulator
  EL020_RS03890 (NCTC11436_00808) ftsA 733610..734983 (+) 1374 WP_020916374.1 cell division protein FtsA -
  EL020_RS03895 (NCTC11436_00809) ftsZ 735003..736328 (+) 1326 WP_020916375.1 cell division protein FtsZ -
  EL020_RS03900 (NCTC11436_00810) - 736328..737002 (+) 675 WP_058813713.1 YggS family pyridoxal phosphate-dependent enzyme -
  EL020_RS03905 (NCTC11436_00811) - 737015..737626 (+) 612 WP_020916377.1 cell division protein SepF -
  EL020_RS03910 (NCTC11436_00812) - 737630..737887 (+) 258 WP_006531549.1 YggT family protein -

Sequence


Protein


Download         Length: 61 a.a.        Molecular weight: 7161.24 Da        Isoelectric Point: 4.3466

>NTDB_id=1118960 EL020_RS03885 WP_043894982.1 733070..733255(+) (prx) [Streptococcus lutetiensis strain NCTC11436]
MLYYDELKKAIDRGFITGDTIQIVRKNGIVFDYVLPNEPVKPYEVVTTERVADVLEELKEW

Nucleotide


Download         Length: 186 bp        

>NTDB_id=1118960 EL020_RS03885 WP_043894982.1 733070..733255(+) (prx) [Streptococcus lutetiensis strain NCTC11436]
ATGTTATATTATGATGAACTAAAAAAGGCAATCGATAGAGGCTTTATAACAGGTGATACTATTCAAATTGTGAGAAAGAA
TGGGATAGTATTTGATTATGTTTTACCTAATGAGCCAGTAAAGCCCTATGAGGTAGTTACTACTGAACGAGTAGCAGACG
TTTTGGAAGAGCTAAAAGAATGGTAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

66.102

96.721

0.639

  prx Streptococcus pyogenes MGAS315

67.241

95.082

0.639

  prx Streptococcus pyogenes MGAS8232

65.517

95.082

0.623

  prx Streptococcus pyogenes MGAS315

63.793

95.082

0.607

  prx Streptococcus pyogenes MGAS315

69.048

68.852

0.475

  prx Streptococcus pyogenes MGAS315

68.293

67.213

0.459

  prx Streptococcus pyogenes MGAS315

65.854

67.213

0.443


Multiple sequence alignment