Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | EL020_RS00895 | Genome accession | NZ_LR134203 |
| Coordinates | 173600..174190 (-) | Length | 196 a.a. |
| NCBI ID | WP_020917303.1 | Uniprot ID | A0AB38G7N9 |
| Organism | Streptococcus lutetiensis strain NCTC11436 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 168600..179190
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL020_RS00865 (NCTC11436_00175) | - | 168860..169624 (-) | 765 | WP_043895098.1 | ABC transporter ATP-binding protein | - |
| EL020_RS00870 (NCTC11436_00176) | - | 169624..170577 (-) | 954 | WP_020917298.1 | branched-chain amino acid ABC transporter permease | - |
| EL020_RS00875 (NCTC11436_00177) | - | 170581..171465 (-) | 885 | WP_020917299.1 | branched-chain amino acid ABC transporter permease | - |
| EL020_RS00880 (NCTC11436_00178) | - | 171523..172701 (-) | 1179 | WP_020917300.1 | ABC transporter substrate-binding protein | - |
| EL020_RS00885 (NCTC11436_00179) | - | 172812..173063 (-) | 252 | WP_020917301.1 | YlbG family protein | - |
| EL020_RS00890 (NCTC11436_00180) | - | 173056..173496 (-) | 441 | WP_020917302.1 | YlbF family regulator | - |
| EL020_RS00895 (NCTC11436_00181) | clpP | 173600..174190 (-) | 591 | WP_020917303.1 | ATP-dependent Clp protease proteolytic subunit | Regulator |
| EL020_RS00900 (NCTC11436_00182) | - | 174267..175160 (-) | 894 | WP_020917304.1 | DMT family transporter | - |
| EL020_RS00905 (NCTC11436_00183) | - | 175274..176143 (+) | 870 | WP_126402330.1 | LysR family transcriptional regulator | - |
| EL020_RS00910 (NCTC11436_00184) | upp | 176214..176843 (-) | 630 | WP_020917306.1 | uracil phosphoribosyltransferase | - |
| EL020_RS00915 (NCTC11436_00185) | - | 176992..178155 (-) | 1164 | WP_043895099.1 | MalY/PatB family protein | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21509.46 Da Isoelectric Point: 4.3919
>NTDB_id=1118935 EL020_RS00895 WP_020917303.1 173600..174190(-) (clpP) [Streptococcus lutetiensis strain NCTC11436]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQSDMAIAAEHLLKTRQNLEQILADNSGQ
SLEKVHADAERDNWMSAQETLEYGFIDQIMVNNELN
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQSDMAIAAEHLLKTRQNLEQILADNSGQ
SLEKVHADAERDNWMSAQETLEYGFIDQIMVNNELN
Nucleotide
Download Length: 591 bp
>NTDB_id=1118935 EL020_RS00895 WP_020917303.1 173600..174190(-) (clpP) [Streptococcus lutetiensis strain NCTC11436]
ATGATTCCTGTAGTTATTGAACAAACAAGCCGCGGCGAACGCTCATATGATATTTACTCACGTCTTTTGAAAGATCGTAT
CATTATGCTGACTGGACCAGTTGAAGACAATATGGCAAATTCTATCATTGCTCAACTATTATTCCTTGATGCACAAGATA
ATACAAAAGATATCTACCTTTATGTTAATACACCTGGTGGATCAGTTTCAGCTGGTCTTGCTATTGTAGATACAATGAAC
TTCATTAAATCAGATGTTCAAACTATCGTTATGGGTATGGCAGCATCAATGGGAACAATCATTGCTTCATCAGGTACAAA
AGGTAAACGATTCATGTTGCCAAACGCTGAATACATGATTCACCAACCAATGGGTGGTACTGGTGGCGGTACTCAACAAA
GTGATATGGCTATTGCTGCTGAACACCTTTTGAAAACACGTCAAAACTTGGAACAAATTTTGGCTGACAACTCAGGTCAA
AGTTTGGAAAAAGTTCACGCAGATGCTGAACGTGATAACTGGATGAGCGCTCAAGAAACTCTTGAATACGGCTTTATCGA
TCAAATTATGGTTAACAACGAATTGAACTAA
ATGATTCCTGTAGTTATTGAACAAACAAGCCGCGGCGAACGCTCATATGATATTTACTCACGTCTTTTGAAAGATCGTAT
CATTATGCTGACTGGACCAGTTGAAGACAATATGGCAAATTCTATCATTGCTCAACTATTATTCCTTGATGCACAAGATA
ATACAAAAGATATCTACCTTTATGTTAATACACCTGGTGGATCAGTTTCAGCTGGTCTTGCTATTGTAGATACAATGAAC
TTCATTAAATCAGATGTTCAAACTATCGTTATGGGTATGGCAGCATCAATGGGAACAATCATTGCTTCATCAGGTACAAA
AGGTAAACGATTCATGTTGCCAAACGCTGAATACATGATTCACCAACCAATGGGTGGTACTGGTGGCGGTACTCAACAAA
GTGATATGGCTATTGCTGCTGAACACCTTTTGAAAACACGTCAAAACTTGGAACAAATTTTGGCTGACAACTCAGGTCAA
AGTTTGGAAAAAGTTCACGCAGATGCTGAACGTGATAACTGGATGAGCGCTCAAGAAACTCTTGAATACGGCTTTATCGA
TCAAATTATGGTTAACAACGAATTGAACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Streptococcus thermophilus LMG 18311 |
95.385 |
99.49 |
0.949 |
| clpP | Streptococcus thermophilus LMD-9 |
95.385 |
99.49 |
0.949 |
| clpP | Streptococcus pneumoniae Rx1 |
92.857 |
100 |
0.929 |
| clpP | Streptococcus pneumoniae D39 |
92.857 |
100 |
0.929 |
| clpP | Streptococcus pneumoniae R6 |
92.857 |
100 |
0.929 |
| clpP | Streptococcus pneumoniae TIGR4 |
92.857 |
100 |
0.929 |
| clpP | Streptococcus pyogenes JRS4 |
88.776 |
100 |
0.888 |
| clpP | Streptococcus pyogenes MGAS315 |
88.776 |
100 |
0.888 |
| clpP | Streptococcus mutans UA159 |
87.755 |
100 |
0.878 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
87.245 |
100 |
0.872 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
86.735 |
100 |
0.867 |
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
58.247 |
98.98 |
0.577 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
58.421 |
96.939 |
0.566 |