Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   ELZ51_RS10445 Genome accession   NZ_LR134094
Coordinates   2073762..2073965 (-) Length   67 a.a.
NCBI ID   WP_415239116.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
IScluster/Tn 2070709..2073480 2073762..2073965 flank 282


Gene organization within MGE regions


Location: 2070709..2073965
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ51_RS10430 - 2070709..2072164 (+) 1456 Protein_2012 IS1182 family transposase -
  ELZ51_RS10435 (NCTC4669_02202) - 2072393..2072701 (+) 309 WP_126427452.1 hypothetical protein -
  ELZ51_RS10440 (NCTC4669_02203) - 2072902..2073765 (+) 864 Protein_2014 IS982 family transposase -
  ELZ51_RS10445 (NCTC4669_02204) prx 2073762..2073965 (-) 204 WP_415239116.1 Paratox Regulator

Sequence

Protein


Download         Length: 67 a.a.        Molecular weight: 7624.61 Da        Isoelectric Point: 4.3285

>NTDB_id=1118303 ELZ51_RS10445 WP_415239116.1 2073762..2073965(-) (prx) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
MLTYDEFKQAINDGYITGDTVAIVRKNGQIFDYVLSSEEWRNCNIGKSGRSVEGVLDLVVYMTNPWC

Nucleotide


Download         Length: 204 bp        

>NTDB_id=1118303 ELZ51_RS10445 WP_415239116.1 2073762..2073965(-) (prx) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
ATGCTAACATACGACGAATTTAAGCAAGCTATTAATGACGGCTATATCACAGGAGACACAGTCGCAATCGTGCGCAAGAA
CGGACAGATTTTTGATTATGTGTTGTCTAGTGAGGAATGGAGAAATTGTAACATAGGAAAAAGTGGAAGAAGTGTTGAGG
GAGTTCTTGATTTAGTCGTTTATATGACTAACCCGTGGTGCTAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

65.517

86.567

0.567
  prx Streptococcus pyogenes MGAS315

82.222

67.164

0.552
  prx Streptococcus pyogenes MGAS315

62.069

86.567

0.537
  prx Streptococcus pyogenes MGAS315

85.714

62.687

0.537
  prx Streptococcus pyogenes MGAS8232

60.345

86.567

0.522
  prx Streptococcus pyogenes MGAS315

82.927

61.194

0.507
  prx Streptococcus pyogenes MGAS315

71.429

62.687

0.448

Multiple sequence alignment