Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   ELZ47_RS11835 Genome accession   NZ_LR134002
Coordinates   2358013..2359185 (+) Length   390 a.a.
NCBI ID   WP_002928599.1    Uniprot ID   A0AAE8K9B5
Organism   Streptococcus sanguinis strain NCTC 10904     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2353013..2364185
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ47_RS11795 (NCTC10904_02323) - 2353437..2354484 (-) 1048 Protein_2233 IS3 family transposase -
  ELZ47_RS11810 (NCTC10904_02327) comE 2354794..2355558 (-) 765 WP_002899424.1 competence system response regulator transcription factor ComE Regulator
  ELZ47_RS11815 comD 2355564..2356897 (-) 1334 Protein_2235 competence system sensor histidine kinase ComD -
  ELZ47_RS11820 (NCTC10904_02330) - 2356926..2357033 (-) 108 WP_126436088.1 competence protein -
  ELZ47_RS11830 (NCTC10904_02332) rlmH 2357330..2357809 (-) 480 WP_126436089.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ELZ47_RS11835 (NCTC10904_02333) htrA 2358013..2359185 (+) 1173 WP_002928599.1 S1C family serine protease Regulator
  ELZ47_RS11840 (NCTC10904_02334) spo0J 2359249..2360010 (+) 762 WP_164549623.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 390 a.a.        Molecular weight: 40901.67 Da        Isoelectric Point: 4.7432

>NTDB_id=1117851 ELZ47_RS11835 WP_002928599.1 2358013..2359185(+) (htrA) [Streptococcus sanguinis strain NCTC 10904]
MKNSSNAIKRALFLFAVLIVGFIGGSLGNYVTTLLTSRVKMNGNSTTSVTTSYKNSTDISEAVKKVQNAVVSVITYAESS
SSVINDESSNDESQISSEGSGVIYKKDGKSAYLVTNTHVLNGSTNVDILLADGNKVPGEVVGSDVYSDISVVKISSEKVT
DVAEFGDSGSLTVGETAIAIGSPLGTEYANSVTQGIISSLGRNVTLQSENGENISTTALQTDAAINPGNSGGPLINIQGQ
VIGITSSKISTNGQTSVEGMGFAIPSNDVVNIINQLEKNGTVTRPALGIQMMDLSNLTTSDFSKLNLPASVKSGILVRSV
QQGMPADGKLQKNDIITKVDNTDVESTSDLQSALYKHSIGDEVEITYYRDGKSQTVKIKLTKSTKELSSN

Nucleotide


Download         Length: 1173 bp        

>NTDB_id=1117851 ELZ47_RS11835 WP_002928599.1 2358013..2359185(+) (htrA) [Streptococcus sanguinis strain NCTC 10904]
ATGAAAAATTCTTCAAATGCCATCAAAAGGGCTTTATTTCTTTTTGCAGTATTAATTGTAGGTTTTATCGGCGGAAGTTT
AGGAAATTATGTTACTACATTATTAACTTCACGTGTAAAAATGAATGGAAATTCGACAACTAGTGTAACTACTTCATATA
AAAACTCTACAGACATTTCAGAAGCTGTGAAAAAGGTTCAAAATGCGGTTGTTTCAGTAATTACTTATGCTGAATCTTCT
AGCAGCGTTATCAATGATGAATCTTCCAACGATGAATCACAAATCTCCAGTGAAGGTTCTGGCGTAATTTATAAAAAAGA
TGGAAAATCAGCCTATCTGGTAACCAATACCCACGTTCTGAACGGATCAACCAATGTAGATATCTTGCTAGCTGATGGAA
ACAAGGTTCCAGGTGAAGTAGTCGGATCAGATGTTTATTCAGATATCTCTGTCGTTAAAATTAGCTCTGAAAAAGTAACT
GATGTCGCTGAATTTGGAGATTCTGGTTCTCTGACAGTTGGTGAAACAGCAATCGCCATCGGAAGCCCTCTTGGAACAGA
ATACGCTAACTCTGTAACACAAGGAATTATTTCTAGTTTAGGCAGAAACGTTACGTTACAATCTGAAAATGGTGAAAATA
TTTCAACAACTGCACTGCAAACAGATGCTGCCATTAACCCCGGTAACTCTGGCGGTCCGCTGATTAATATTCAAGGGCAA
GTAATTGGCATTACTTCAAGTAAAATTTCGACAAATGGCCAAACTTCTGTTGAAGGGATGGGATTTGCGATTCCATCTAA
TGATGTCGTAAATATTATCAATCAATTAGAGAAAAATGGAACAGTCACACGTCCTGCTTTAGGAATTCAAATGATGGATT
TATCTAATCTGACAACTTCTGATTTTTCTAAATTAAATCTTCCTGCTTCAGTGAAATCAGGTATTCTTGTTCGCTCTGTT
CAGCAAGGAATGCCTGCTGATGGCAAGCTTCAAAAAAATGATATCATTACAAAAGTAGATAATACAGATGTGGAATCCAC
TAGTGACCTTCAGTCTGCTCTCTACAAGCATAGTATTGGAGATGAAGTAGAGATTACTTATTATCGAGATGGTAAATCTC
AAACAGTCAAAATCAAACTCACTAAATCAACAAAAGAGTTAAGCTCAAATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus gordonii str. Challis substr. CH1

66.919

100

0.679

  htrA Streptococcus mitis NCTC 12261

63.613

100

0.641

  htrA Streptococcus pneumoniae Rx1

63.613

100

0.641

  htrA Streptococcus pneumoniae D39

63.613

100

0.641

  htrA Streptococcus pneumoniae R6

63.613

100

0.641

  htrA Streptococcus pneumoniae TIGR4

63.613

100

0.641

  htrA Streptococcus mutans UA159

54.177

100

0.549


Multiple sequence alignment