Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   ELZ47_RS11840 Genome accession   NZ_LR134002
Coordinates   2359249..2360010 (+) Length   253 a.a.
NCBI ID   WP_164549623.1    Uniprot ID   A0AAE8K8Y9
Organism   Streptococcus sanguinis strain NCTC 10904     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2354249..2365010
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ47_RS11810 (NCTC10904_02327) comE 2354794..2355558 (-) 765 WP_002899424.1 competence system response regulator transcription factor ComE Regulator
  ELZ47_RS11815 comD 2355564..2356897 (-) 1334 Protein_2235 competence system sensor histidine kinase ComD -
  ELZ47_RS11820 (NCTC10904_02330) - 2356926..2357033 (-) 108 WP_126436088.1 competence protein -
  ELZ47_RS11830 (NCTC10904_02332) rlmH 2357330..2357809 (-) 480 WP_126436089.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ELZ47_RS11835 (NCTC10904_02333) htrA 2358013..2359185 (+) 1173 WP_002928599.1 S1C family serine protease Regulator
  ELZ47_RS11840 (NCTC10904_02334) spo0J 2359249..2360010 (+) 762 WP_164549623.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 253 a.a.        Molecular weight: 29371.18 Da        Isoelectric Point: 9.3855

>NTDB_id=1117852 ELZ47_RS11840 WP_164549623.1 2359249..2360010(+) (spo0J) [Streptococcus sanguinis strain NCTC 10904]
MENFQYIALKDIRTNPYQPRKEFSQKKIEELAASIKENGLIQPIILRKSSLFGYEILAGERRFRAASFLGLETIPAVVKE
LSDDDMLKQAIIENLQREDLNPIEEAESYQNLIDKGLTHDEIAKIMGKSRPYISNIVRLLQLAKEVRQAIKEEEISQGHA
RLLVPLKEEEQLLWLEKICREDLSVRAVEKLLQQKKSLKKKPNKELFAKSEEEKIKKILGLKVSIQLKNQSKGKLIIPFE
SEEEYQRIINSFK

Nucleotide


Download         Length: 762 bp        

>NTDB_id=1117852 ELZ47_RS11840 WP_164549623.1 2359249..2360010(+) (spo0J) [Streptococcus sanguinis strain NCTC 10904]
ATGGAAAACTTTCAATATATTGCACTCAAAGACATTCGAACCAATCCTTATCAGCCTCGTAAAGAGTTCTCACAAAAAAA
GATTGAAGAATTAGCGGCATCAATCAAAGAAAATGGTCTCATTCAGCCAATCATTCTTCGGAAATCTTCACTTTTTGGTT
ATGAAATTTTAGCAGGAGAACGGAGATTTAGAGCTGCCTCTTTTCTTGGCCTAGAAACGATTCCAGCTGTCGTCAAAGAA
TTATCTGATGATGACATGCTGAAACAGGCCATTATCGAAAATCTTCAAAGAGAAGACTTGAATCCTATAGAAGAGGCTGA
GTCTTATCAAAATTTGATTGACAAAGGCTTGACACATGATGAAATTGCTAAAATCATGGGAAAATCTAGACCCTATATCA
GCAATATTGTCAGACTTTTACAGCTGGCTAAAGAAGTTCGTCAAGCTATCAAGGAAGAAGAGATTTCTCAAGGACATGCT
CGCCTGCTGGTTCCCTTAAAAGAAGAGGAACAATTACTATGGTTGGAAAAGATCTGTCGAGAAGATTTATCAGTTCGAGC
GGTTGAAAAACTTCTCCAGCAAAAAAAGAGTCTCAAAAAGAAACCTAATAAAGAACTGTTTGCTAAATCTGAAGAGGAAA
AAATTAAAAAAATTCTCGGTCTGAAAGTTTCTATTCAGTTAAAAAACCAGAGTAAAGGAAAGCTGATTATTCCTTTTGAA
AGCGAAGAAGAATATCAAAGAATTATAAACAGTTTTAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(145-194)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

52.988

99.209

0.526

Multiple sequence alignment