Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA   Type   Regulator
Locus tag   ELZ47_RS02115 Genome accession   NZ_LR134002
Coordinates   421596..423572 (+) Length   658 a.a.
NCBI ID   WP_125332710.1    Uniprot ID   A0AAJ5NMZ8
Organism   Streptococcus sanguinis strain NCTC 10904     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 416596..428572
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ47_RS02100 (NCTC10904_00417) amiA 417244..419199 (+) 1956 WP_164549538.1 peptide ABC transporter substrate-binding protein Regulator
  ELZ47_RS02105 (NCTC10904_00418) amiA3 419392..421362 (+) 1971 WP_126435155.1 peptide ABC transporter substrate-binding protein Regulator
  ELZ47_RS02115 (NCTC10904_00419) amiA 421596..423572 (+) 1977 WP_125332710.1 peptide ABC transporter substrate-binding protein Regulator
  ELZ47_RS02120 (NCTC10904_00420) amiC 423637..425133 (+) 1497 WP_125332708.1 ABC transporter permease Regulator
  ELZ47_RS02125 (NCTC10904_00421) amiD 425133..426059 (+) 927 WP_072074535.1 oligopeptide ABC transporter permease OppC Regulator
  ELZ47_RS02130 (NCTC10904_00422) amiE 426068..427135 (+) 1068 WP_125445638.1 ABC transporter ATP-binding protein Regulator
  ELZ47_RS02135 (NCTC10904_00423) amiF 427146..428072 (+) 927 WP_125332704.1 ATP-binding cassette domain-containing protein Regulator

Sequence

Protein


Download         Length: 658 a.a.        Molecular weight: 73238.34 Da        Isoelectric Point: 4.6620

>NTDB_id=1117799 ELZ47_RS02115 WP_125332710.1 421596..423572(+) (amiA) [Streptococcus sanguinis strain NCTC 10904]
MKQSKVLALAGVTLLAAGILAACSGSKPKTNSGSSTTFNYIYETDPENLNYLTSSKAATTDLTANVIDGLLENDQYGNLV
PSMAEEWTVSPDGKTYTYKLRKDAKWYTSEGEEYADVTAEDFVTGLKYAADNKSETIYLVQDSVKGLKDYISGKIDFSEV
GIKAVDDHTVEYTLNEPESFWNSKTTMGILYPVNKDFLKNQGDKFAQATDPTSLLYNGPFLLKSLTSKSEIQFEKNPNYW
DKENVHVDAVKLSFYDGQDQGKPAEQFSQGALTTARLFPTSATYEKVEKDFKDNIVYTPQDASTFLVGTNIDRQSYNHTA
KTSETQKTSTKKALLNKDFRQALTFAFNRESYASQINGKDGADKLLRNLYIPPTFVQAGDKSFGDLVKEKVVTYGDEWKD
VDFSDGQDGFYNENKAKAEFEKAKEALKADGVEFPIHLDIPVDQTATSKVQRVQSLKQSIEKTLGTDNVVIDVHQLSKDE
VTNITLFAPSAAEEDWDISDNVGWSPDYQDPSTYLDVIKPGGENTKTFLGFDGTDNAAAKQVGLDEYTKLVEEAGAEKMD
LNKRYEKYAAAQAWLTDSALLIPVTSRTGRPTLTKVVPFSAPFAWSGAKAREAASYKYMKLQDETVTTKDYNSAQEKWNK
ERVESNKKAQEELADHVK

Nucleotide


Download         Length: 1977 bp        

>NTDB_id=1117799 ELZ47_RS02115 WP_125332710.1 421596..423572(+) (amiA) [Streptococcus sanguinis strain NCTC 10904]
ATGAAACAAAGCAAAGTCCTTGCACTTGCAGGAGTGACACTTCTTGCCGCTGGAATTCTTGCAGCTTGCTCAGGCTCTAA
GCCAAAGACAAACTCAGGCAGCTCTACGACCTTTAATTATATCTACGAAACAGACCCTGAAAACTTGAACTATCTTACTT
CAAGTAAGGCAGCTACTACAGACTTGACAGCCAATGTCATTGATGGTCTTTTAGAAAACGACCAATATGGGAACTTAGTT
CCATCAATGGCAGAGGAATGGACTGTATCACCAGATGGAAAAACTTATACTTACAAACTTCGCAAAGATGCTAAGTGGTA
TACTTCCGAAGGTGAAGAGTACGCAGATGTGACAGCAGAAGACTTTGTTACAGGTCTTAAGTATGCTGCAGACAATAAAT
CTGAAACAATCTACTTGGTTCAGGATTCTGTCAAAGGGCTTAAGGACTATATTTCTGGGAAGATTGATTTCTCAGAAGTA
GGGATCAAAGCAGTTGATGATCATACCGTTGAATATACTCTTAATGAGCCAGAAAGCTTCTGGAATTCTAAGACAACAAT
GGGAATTCTATACCCAGTAAACAAAGACTTTTTGAAAAACCAAGGTGATAAGTTCGCTCAAGCAACTGATCCAACAAGCT
TGCTTTATAACGGACCTTTCTTGCTCAAATCATTGACTTCAAAATCTGAAATTCAATTTGAGAAGAATCCTAATTATTGG
GACAAAGAAAATGTTCACGTAGATGCAGTTAAACTCTCTTTCTATGACGGGCAAGACCAAGGGAAGCCAGCTGAGCAGTT
CAGTCAAGGTGCTCTGACAACAGCTAGACTCTTCCCAACTAGTGCGACTTATGAAAAGGTTGAAAAAGACTTTAAAGATA
ATATCGTCTATACACCTCAAGATGCCTCAACTTTCTTAGTAGGTACAAACATTGATCGTCAGTCATACAACCATACTGCT
AAGACGTCAGAAACTCAAAAGACTTCAACTAAGAAAGCCTTGCTTAACAAGGACTTCCGTCAGGCTTTGACCTTTGCCTT
CAATCGTGAGTCTTATGCATCTCAGATTAATGGTAAGGACGGAGCAGACAAACTTCTTCGTAACCTTTACATTCCGCCTA
CATTTGTACAAGCTGGTGACAAGTCCTTCGGTGACTTAGTTAAGGAAAAAGTCGTAACCTATGGTGACGAATGGAAAGAT
GTGGACTTCTCAGATGGCCAAGATGGATTCTATAACGAGAACAAAGCTAAGGCTGAATTTGAAAAAGCAAAAGAAGCTTT
GAAAGCCGATGGCGTAGAATTCCCAATCCATCTGGACATTCCGGTTGATCAAACAGCTACTTCTAAAGTACAGCGCGTTC
AATCCCTCAAGCAGTCTATTGAAAAGACTTTGGGAACAGATAATGTTGTGATTGATGTTCACCAATTGTCTAAAGATGAA
GTGACCAACATTACCTTGTTCGCACCTTCTGCTGCTGAAGAGGACTGGGATATTTCAGACAATGTCGGCTGGTCTCCTGA
CTATCAAGACCCATCTACCTATCTGGATGTTATCAAACCTGGTGGTGAGAATACTAAGACCTTCTTAGGATTTGACGGCA
CCGATAATGCTGCAGCAAAACAAGTTGGTTTGGATGAATATACCAAATTAGTTGAAGAAGCTGGAGCAGAGAAGATGGAT
CTCAACAAGCGCTACGAAAAATACGCGGCTGCTCAGGCTTGGCTGACTGATAGTGCTTTGTTGATTCCGGTAACTTCTAG
AACTGGCCGTCCAACCTTGACTAAGGTAGTACCATTCTCAGCACCGTTTGCTTGGTCTGGTGCTAAGGCGCGTGAAGCAG
CAAGTTATAAGTACATGAAATTGCAGGATGAGACTGTAACGACAAAAGATTATAATAGCGCTCAGGAAAAATGGAATAAA
GAACGTGTGGAATCTAATAAAAAAGCTCAAGAAGAATTAGCAGACCACGTGAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(79-520)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA Streptococcus salivarius strain HSISS4

59.909

100

0.602
  amiA3 Streptococcus thermophilus LMD-9

59.758

100

0.6
  amiA3 Streptococcus thermophilus LMG 18311

59.455

100

0.597

Multiple sequence alignment