Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA   Type   Regulator
Locus tag   ELZ47_RS02100 Genome accession   NZ_LR134002
Coordinates   417244..419199 (+) Length   651 a.a.
NCBI ID   WP_164549538.1    Uniprot ID   A0AAJ5NGA6
Organism   Streptococcus sanguinis strain NCTC 10904     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 412244..424199
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ47_RS02080 (NCTC10904_00413) - 412470..413702 (+) 1233 WP_126435146.1 cysteine desulfurase -
  ELZ47_RS02085 (NCTC10904_00414) sufU 413689..414126 (+) 438 WP_126435148.1 Fe-S cluster assembly sulfur transfer protein SufU -
  ELZ47_RS02090 (NCTC10904_00415) sufB 414144..415556 (+) 1413 WP_126435149.1 Fe-S cluster assembly protein SufB -
  ELZ47_RS02095 (NCTC10904_00416) pbp3 415680..416948 (-) 1269 WP_126435151.1 D-alanyl-D-alanine carboxypeptidase PBP3 -
  ELZ47_RS02100 (NCTC10904_00417) amiA 417244..419199 (+) 1956 WP_164549538.1 peptide ABC transporter substrate-binding protein Regulator
  ELZ47_RS02105 (NCTC10904_00418) amiA3 419392..421362 (+) 1971 WP_126435155.1 peptide ABC transporter substrate-binding protein Regulator
  ELZ47_RS02115 (NCTC10904_00419) amiA 421596..423572 (+) 1977 WP_125332710.1 peptide ABC transporter substrate-binding protein Regulator

Sequence

Protein


Download         Length: 651 a.a.        Molecular weight: 72671.65 Da        Isoelectric Point: 4.6191

>NTDB_id=1117797 ELZ47_RS02100 WP_164549538.1 417244..419199(+) (amiA) [Streptococcus sanguinis strain NCTC 10904]
MKKSKWLAITGLTVVSTLILAACGSSSASNTYSYVYIADPDTLDYVNSNRATTSDVASNLVDGLLENDKYGNLVPSIAED
WTVSKDGLTYTYKLRKDAKWYTSDGEEYESVKAQDFVTGLKHAADEKSEALPIVQSSIKGLDAYVKGESNDFSTVGVKAV
DDYTVEYTLNQPESYWNSKTTMGILFPINKEFLESKGKDFGTVKPSSILYNGPYILKAFTSKSVIEYAKNQNYWDKDNVK
VENIKLTYYDGSDQESLIRNFSDGAYSQARLYPTSSNYASVEKQYKDNIIYTPQNSTSYFFSFNLNRKAYNHSSKTTDAQ
KTATTAAIQNKDFRQAINFAFDRTSFGAQMNGKDGATKLIRSLLVPPSFVQVDGKDFSDVVESKLPTYGDEWSGVKLTDA
QDSIYNADKAKAEFAKAKETLQVEGVEFPIHIDVPVDQTDKVLVQRTNSFKQSVEAALGQENVVIDVQQMSTDDYDNSAY
FAETAAQKDYDLNMSGWSADYQDPSTYLNIFNPETGDILDNIGLEKGKNQDIVNKVGLNEYKELLDDADKEKQDTDARYT
KYAAAQAWLTDSSIVIPSVSAGGSPVVQKVVPFTKSYSYVGIKGDVYVFKNMELQNDIVTAKDYEAALKKWEKEKEASNK
KAQEELEKHIK

Nucleotide


Download         Length: 1956 bp        

>NTDB_id=1117797 ELZ47_RS02100 WP_164549538.1 417244..419199(+) (amiA) [Streptococcus sanguinis strain NCTC 10904]
ATGAAAAAATCTAAATGGTTGGCCATTACTGGACTGACAGTCGTGTCAACACTGATTTTAGCCGCTTGTGGAAGCTCTAG
CGCCAGCAATACTTACTCTTATGTTTATATTGCTGACCCTGATACCTTGGACTATGTAAACTCCAATCGGGCAACGACTT
CTGATGTGGCTTCAAATCTGGTTGATGGACTTTTGGAAAATGACAAGTATGGCAATCTGGTTCCATCTATTGCGGAAGAC
TGGACTGTTTCAAAGGATGGACTGACCTATACCTATAAGCTTCGTAAAGATGCTAAATGGTACACTTCAGATGGAGAGGA
ATATGAAAGTGTCAAAGCCCAGGACTTTGTCACTGGTTTGAAGCATGCGGCAGATGAAAAATCAGAAGCTCTTCCAATCG
TCCAAAGCTCTATCAAAGGCTTGGATGCCTATGTCAAGGGTGAGTCAAATGACTTTTCAACGGTTGGCGTCAAGGCTGTC
GATGACTATACGGTCGAGTACACTCTTAACCAGCCAGAAAGTTATTGGAATTCCAAGACGACCATGGGGATTCTCTTTCC
GATTAATAAAGAATTCTTGGAATCAAAAGGAAAAGATTTTGGTACTGTAAAACCTTCTTCCATTCTTTATAATGGCCCTT
ATATTCTGAAGGCTTTTACTTCTAAGTCTGTCATTGAATACGCTAAAAACCAGAACTACTGGGATAAGGACAATGTCAAG
GTTGAAAATATAAAACTGACTTACTATGATGGTTCAGATCAGGAATCCTTGATCCGCAACTTCTCAGACGGAGCCTATTC
TCAAGCACGGCTTTACCCAACAAGCTCTAACTACGCTTCTGTTGAAAAGCAGTACAAAGACAATATTATCTACACACCAC
AGAACTCAACCAGCTATTTCTTTAGCTTCAATCTGAATCGTAAGGCTTATAATCATTCGTCTAAGACCACAGATGCTCAG
AAGACAGCGACTACAGCGGCTATTCAAAACAAGGATTTCCGTCAGGCGATTAACTTTGCCTTTGACCGTACATCTTTTGG
AGCTCAGATGAATGGCAAAGATGGAGCGACTAAACTCATCCGTAGCTTGCTTGTTCCTCCTAGCTTCGTGCAGGTTGATG
GCAAAGACTTTTCAGATGTTGTAGAGAGCAAACTTCCTACATACGGCGATGAGTGGAGCGGTGTCAAACTGACAGATGCC
CAAGACAGCATCTACAATGCTGACAAGGCTAAGGCAGAGTTTGCTAAGGCTAAAGAAACCTTACAAGTAGAAGGTGTTGA
ATTCCCTATCCATATTGATGTTCCTGTGGATCAGACTGATAAAGTCTTAGTACAGCGAACCAACTCTTTCAAACAGTCTG
TTGAAGCAGCGCTTGGTCAAGAAAATGTCGTTATTGATGTTCAGCAAATGTCCACAGATGATTATGATAACTCTGCCTAC
TTTGCAGAAACAGCAGCTCAGAAAGACTACGACCTCAATATGTCTGGCTGGTCAGCGGATTATCAAGATCCATCAACTTA
TCTGAATATTTTCAACCCAGAAACTGGTGATATTCTGGATAATATAGGCTTAGAAAAAGGGAAAAATCAAGATATCGTCA
ACAAAGTCGGCTTGAACGAATACAAAGAGTTATTGGATGATGCAGATAAGGAAAAACAAGATACTGACGCTCGTTATACC
AAATACGCAGCAGCTCAGGCTTGGCTGACAGATAGCTCCATTGTTATTCCTAGTGTTTCTGCGGGTGGTTCACCAGTTGT
TCAGAAGGTCGTGCCATTTACCAAGTCTTACTCTTATGTCGGAATCAAAGGAGATGTCTATGTCTTTAAGAACATGGAAC
TCCAAAATGATATTGTGACAGCTAAAGACTATGAAGCGGCTCTTAAGAAATGGGAAAAAGAAAAGGAAGCATCCAACAAA
AAAGCCCAAGAAGAGCTAGAAAAACACATCAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(73-515)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA Streptococcus salivarius strain HSISS4

56.86

100

0.573
  amiA3 Streptococcus thermophilus LMD-9

55.015

100

0.556
  amiA3 Streptococcus thermophilus LMG 18311

54.711

100

0.553

Multiple sequence alignment