Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   EW025_RS08310 Genome accession   NZ_LR130238
Coordinates   1596758..1596940 (-) Length   60 a.a.
NCBI ID   WP_002988483.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain HKU419 isolate HKU419     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1591758..1601940
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EW025_RS08295 - 1592019..1592480 (-) 462 WP_002988493.1 deoxycytidylate deaminase -
  EW025_RS08300 - 1592515..1593588 (-) 1074 WP_010922627.1 M24 family metallopeptidase -
  EW025_RS08305 uvrA 1593703..1596531 (-) 2829 WP_015055996.1 excinuclease ABC subunit UvrA -
  EW025_RS08310 prx 1596758..1596940 (-) 183 WP_002988483.1 hypothetical protein Regulator
  EW025_RS08315 mf2 1597180..1597938 (+) 759 WP_002985324.1 DNase Mf2 -
  EW025_RS08320 speC 1598049..1598756 (+) 708 WP_002988478.1 streptococcal pyrogenic exotoxin SpeC -
  EW025_RS08325 - 1598824..1598958 (-) 135 WP_002988476.1 hypothetical protein -
  EW025_RS08330 entC3 1599071..1599853 (-) 783 WP_002988472.1 enterotoxin type C3 EntC3 -
  EW025_RS08335 - 1600101..1601225 (-) 1125 WP_002988467.1 Fic family protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6952.00 Da        Isoelectric Point: 3.9017

>NTDB_id=1116632 EW025_RS08310 WP_002988483.1 1596758..1596940(-) (prx) [Streptococcus pyogenes strain HKU419 isolate HKU419]
MLTYDEFKQAIDNGYITADTVMIVRKNGQIFDYVLPDEPVRPWEVMTVEVVGEVMVELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=1116632 EW025_RS08310 WP_002988483.1 1596758..1596940(-) (prx) [Streptococcus pyogenes strain HKU419 isolate HKU419]
ATGCTAACATACGACGAATTTAAACAAGCAATTGACAATGGATATATCACAGCAGACACAGTAATGATCGTGCGCAAGAA
CGGACAGATTTTTGATTATGTGTTGCCCGATGAGCCTGTGAGACCGTGGGAGGTTATGACAGTTGAAGTAGTGGGAGAAG
TGATGGTGGAATTAGACAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

80

100

0.8
  prx Streptococcus pyogenes MGAS315

80

100

0.8
  prx Streptococcus pyogenes MGAS315

76.667

100

0.767
  prx Streptococcus pyogenes MGAS315

75

100

0.75
  prx Streptococcus pyogenes MGAS8232

73.333

100

0.733
  prx Streptococcus pyogenes MGAS315

85.366

68.333

0.583
  prx Streptococcus pyogenes MGAS315

75.61

68.333

0.517

Multiple sequence alignment