Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   EW024_RS01470 Genome accession   NZ_LR130237
Coordinates   269873..270424 (+) Length   183 a.a.
NCBI ID   WP_010921894.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain SP444 isolate SP444     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 264873..275424
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EW024_RS01470 comX/sigX/comX2/sigX2 269873..270424 (+) 552 WP_010921894.1 sigma-70 family RNA polymerase sigma factor Regulator
  EW024_RS01475 - 270983..271510 (+) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  EW024_RS01480 yqeH 271510..272628 (+) 1119 WP_146707955.1 ribosome biogenesis GTPase YqeH -
  EW024_RS01485 yhbY 272653..272961 (+) 309 WP_002991094.1 ribosome assembly RNA-binding protein YhbY -
  EW024_RS01490 - 273030..273662 (+) 633 WP_002991091.1 nicotinate-nucleotide adenylyltransferase -
  EW024_RS01495 yqeK 273659..274252 (+) 594 WP_003055753.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  EW024_RS01500 - 274228..274488 (+) 261 WP_011528257.1 isochorismatase family protein -
  EW024_RS01505 rsfS 274490..274843 (+) 354 WP_003049699.1 ribosome silencing factor -

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22281.08 Da        Isoelectric Point: 10.0375

>NTDB_id=1116554 EW024_RS01470 WP_010921894.1 269873..270424(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain SP444 isolate SP444]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=1116554 EW024_RS01470 WP_010921894.1 269873..270424(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain SP444 isolate SP444]
GTGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.