Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | VV34_RS18905 | Genome accession | NZ_LN649259 |
| Coordinates | 3582279..3582872 (+) | Length | 197 a.a. |
| NCBI ID | WP_003228214.1 | Uniprot ID | A0A199WEF2 |
| Organism | Bacillus subtilis strain BS49 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3577279..3587872
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VV34_RS18875 (BS49_37740) | psmA | 3577533..3577868 (+) | 336 | WP_003242480.1 | SMR family transporter | - |
| VV34_RS18880 (BS49_37750) | psmB | 3577868..3578188 (+) | 321 | WP_003228222.1 | QacE family quaternary ammonium compound efflux SMR transporter | - |
| VV34_RS18885 (BS49_37760) | yvdQ | 3578224..3578736 (-) | 513 | WP_003243249.1 | DUF3231 family protein | - |
| VV34_RS18890 (BS49_37770) | cotNP | 3578988..3580331 (-) | 1344 | WP_003228217.1 | FAD-binding oxidoreductase | - |
| VV34_RS18895 (BS49_37780) | cotR | 3580687..3581649 (+) | 963 | WP_003243674.1 | sporulation hydrolase CotR | - |
| VV34_RS18905 (BS49_37800) | clpP | 3582279..3582872 (+) | 594 | WP_003228214.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| VV34_RS18910 (BS49_37810) | pgmB | 3582918..3583598 (-) | 681 | WP_003228210.1 | beta-phosphoglucomutase | - |
| VV34_RS18915 (BS49_37820) | malL | 3583595..3585280 (-) | 1686 | WP_003243333.1 | oligo-1,6-glucosidase | - |
| VV34_RS18920 (BS49_37830) | mdxK | 3585273..3587546 (-) | 2274 | WP_003243769.1 | maltose phosphorylase | - |
Sequence
Protein
Download Length: 197 a.a. Molecular weight: 21682.00 Da Isoelectric Point: 4.9416
>NTDB_id=1113811 VV34_RS18905 WP_003228214.1 3582279..3582872(+) (clpP) [Bacillus subtilis strain BS49]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSAEEALEYGLIDKILTHTEDKK
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSAEEALEYGLIDKILTHTEDKK
Nucleotide
Download Length: 594 bp
>NTDB_id=1113811 VV34_RS18905 WP_003228214.1 3582279..3582872(+) (clpP) [Bacillus subtilis strain BS49]
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGGGAAAGAGCGTATGACATTTATTCTCGTCTATTAAAGGA
TCGTATCATCATGCTTGGATCTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCTTAGCAGCAG
AAGACCCTGAAAAAGAAATTTCTCTTTACATCAACAGCCCGGGCGGCTCTATTACAGCCGGTATGGCGATCTATGATACC
ATGCAGTTTATTAAGCCGAAGGTATCTACAATTTGTATCGGTATGGCTGCGTCAATGGGCGCGTTCCTGCTTGCAGCCGG
CGAAAAAGGCAAACGCTATGCGCTTCCAAACAGTGAAGTCATGATTCACCAGCCTCTTGGCGGTGCGCAAGGTCAAGCGA
CAGAAATTGAAATTGCTGCGAAACGCATTCTCTTGCTTCGCGACAAATTAAACAAAGTCCTAGCTGAACGTACTGGCCAG
CCGCTTGAAGTGATCGAACGCGACACAGACCGTGATAACTTCAAGTCTGCTGAAGAAGCGCTTGAATACGGCCTGATTGA
CAAAATTTTGACTCACACAGAAGACAAAAAGTAA
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGGGAAAGAGCGTATGACATTTATTCTCGTCTATTAAAGGA
TCGTATCATCATGCTTGGATCTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCTTAGCAGCAG
AAGACCCTGAAAAAGAAATTTCTCTTTACATCAACAGCCCGGGCGGCTCTATTACAGCCGGTATGGCGATCTATGATACC
ATGCAGTTTATTAAGCCGAAGGTATCTACAATTTGTATCGGTATGGCTGCGTCAATGGGCGCGTTCCTGCTTGCAGCCGG
CGAAAAAGGCAAACGCTATGCGCTTCCAAACAGTGAAGTCATGATTCACCAGCCTCTTGGCGGTGCGCAAGGTCAAGCGA
CAGAAATTGAAATTGCTGCGAAACGCATTCTCTTGCTTCGCGACAAATTAAACAAAGTCCTAGCTGAACGTACTGGCCAG
CCGCTTGAAGTGATCGAACGCGACACAGACCGTGATAACTTCAAGTCTGCTGAAGAAGCGCTTGAATACGGCCTGATTGA
CAAAATTTTGACTCACACAGAAGACAAAAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
68.617 |
95.431 |
0.655 |
| clpP | Streptococcus thermophilus LMG 18311 |
58.163 |
99.492 |
0.579 |
| clpP | Streptococcus thermophilus LMD-9 |
58.163 |
99.492 |
0.579 |
| clpP | Streptococcus pneumoniae D39 |
57.812 |
97.462 |
0.563 |
| clpP | Streptococcus pneumoniae Rx1 |
57.812 |
97.462 |
0.563 |
| clpP | Streptococcus pneumoniae R6 |
57.812 |
97.462 |
0.563 |
| clpP | Streptococcus pneumoniae TIGR4 |
57.812 |
97.462 |
0.563 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
57.895 |
96.447 |
0.558 |
| clpP | Streptococcus pyogenes JRS4 |
56.122 |
99.492 |
0.558 |
| clpP | Streptococcus pyogenes MGAS315 |
56.122 |
99.492 |
0.558 |
| clpP | Streptococcus mutans UA159 |
54.822 |
100 |
0.548 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
55.789 |
96.447 |
0.538 |