Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | VANGNB10_RS10950 | Genome accession | NZ_LK021130 |
| Coordinates | 1172761..1173060 (+) | Length | 99 a.a. |
| NCBI ID | WP_017047776.1 | Uniprot ID | A0A1Y0NUT1 |
| Organism | Vibrio anguillarum strain NB10 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1167761..1178060
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VANGNB10_RS10935 (TVA1835) | lon | 1167782..1170133 (+) | 2352 | WP_013857184.1 | endopeptidase La | - |
| VANGNB10_RS10940 (TVA1834) | - | 1170329..1170601 (+) | 273 | WP_026027116.1 | HU family DNA-binding protein | - |
| VANGNB10_RS10945 (TVA1833) | ppiD | 1170759..1172624 (+) | 1866 | WP_013857182.1 | peptidylprolyl isomerase | - |
| VANGNB10_RS10950 (TVA1832) | comEA | 1172761..1173060 (+) | 300 | WP_017047776.1 | ComEA family DNA-binding protein | Machinery gene |
| VANGNB10_RS10955 (TVA1831) | cmk | 1173224..1173904 (+) | 681 | WP_013857180.1 | (d)CMP kinase | - |
| VANGNB10_RS10960 (TVA1830) | rpsA | 1174008..1175678 (+) | 1671 | WP_013857179.1 | 30S ribosomal protein S1 | - |
| VANGNB10_RS10965 (TVA1829) | ihfB | 1175755..1176039 (+) | 285 | WP_010317449.1 | integration host factor subunit beta | - |
| VANGNB10_RS10970 (TVA1828) | - | 1176181..1176456 (+) | 276 | WP_013857177.1 | LapA family protein | - |
| VANGNB10_RS10975 (TVA1827) | lapB | 1176476..1177645 (+) | 1170 | WP_026028046.1 | lipopolysaccharide assembly protein LapB | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 10804.74 Da Isoelectric Point: 9.6909
>NTDB_id=1113438 VANGNB10_RS10950 WP_017047776.1 1172761..1173060(+) (comEA) [Vibrio anguillarum strain NB10]
MKLKTKLGLLLLSIVLPLSPTLAEEKVVETHQGIEITVNINQASAEEIATLLKGIGLKKAQAIVEYRQQNGDFKTKEDLS
LVKGIGAVTVRQNAERIIL
MKLKTKLGLLLLSIVLPLSPTLAEEKVVETHQGIEITVNINQASAEEIATLLKGIGLKKAQAIVEYRQQNGDFKTKEDLS
LVKGIGAVTVRQNAERIIL
Nucleotide
Download Length: 300 bp
>NTDB_id=1113438 VANGNB10_RS10950 WP_017047776.1 1172761..1173060(+) (comEA) [Vibrio anguillarum strain NB10]
ATGAAATTGAAAACAAAACTCGGGTTGTTACTTCTAAGTATCGTATTGCCTCTTTCACCGACATTAGCAGAAGAAAAGGT
GGTAGAAACGCACCAAGGCATTGAAATTACGGTTAATATAAATCAGGCTTCCGCTGAGGAAATTGCTACTTTGTTGAAAG
GTATTGGACTTAAAAAAGCACAAGCGATTGTTGAATATCGTCAACAAAATGGCGATTTTAAAACCAAAGAAGATCTGAGC
TTGGTGAAAGGCATTGGTGCCGTTACTGTCAGGCAAAACGCTGAGCGTATCATTTTATAA
ATGAAATTGAAAACAAAACTCGGGTTGTTACTTCTAAGTATCGTATTGCCTCTTTCACCGACATTAGCAGAAGAAAAGGT
GGTAGAAACGCACCAAGGCATTGAAATTACGGTTAATATAAATCAGGCTTCCGCTGAGGAAATTGCTACTTTGTTGAAAG
GTATTGGACTTAAAAAAGCACAAGCGATTGTTGAATATCGTCAACAAAATGGCGATTTTAAAACCAAAGAAGATCTGAGC
TTGGTGAAAGGCATTGGTGCCGTTACTGTCAGGCAAAACGCTGAGCGTATCATTTTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
59.223 |
100 |
0.616 |
| comEA | Vibrio cholerae strain A1552 |
59.223 |
100 |
0.616 |
| comEA | Vibrio campbellii strain DS40M4 |
58.163 |
98.99 |
0.576 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
58.889 |
90.909 |
0.535 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
39.286 |
100 |
0.444 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
40 |
100 |
0.444 |
| comEA | Legionella pneumophila str. Paris |
36.735 |
98.99 |
0.364 |
| comEA | Legionella pneumophila strain ERS1305867 |
36.735 |
98.99 |
0.364 |